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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

ATGCAGGATATTTATGGAGCTTCTGGTTACTTTTTGGAGAAGGATTCTGTGAAAAAGGAGAAACATTTgtaagtttcttctcaattttgagctgtcctcatcttttgacatggttattaaatatacctctgggaaagttgggacaaggttggcaagttggttttaatt...

Basic information

species Glycine max
transcript GLYMA01G38410.4
intron # 8
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|193585459|gb|FK541140.1|FK541140
EST:     GCTTCTGGTTACTTTTTGGAGAAGGATTCTGTGAAAAAGGAGAAACATTT                         GCAATCTTTGAAATTGACTGAGGTGACTGTAAGTGACCAGCTTGAAGGTTT
genomic: GCTTCTGGTTACTTTTTGGAGAAGGATTCTGTGAAAAAGGAGAAACATTTgtaagtttct ... acattggcagGCAATCTTTGAAATTGACTGAGGTGACTGTAAGTGACCAGCTTGAAGGTTT
EST: gi|208115878|gb|GD912229.1|GD912229
EST:     GCTTCTGGTTACTTTTTGGAGAAGGATTCTGTGAAAAAGGAGAAACATTT                         GCAATCTTTGAAATTGACTGAGGTGACTGTAAGTGACCAGCTTGAAGGTTT
genomic: GCTTCTGGTTACTTTTTGGAGAAGGATTCTGTGAAAAAGGAGAAACATTTgtaagtttct ... acattggcagGCAATCTTTGAAATTGACTGAGGTGACTGTAAGTGACCAGCTTGAAGGTTT
EST: gi|193359415|gb|FK326334.1|FK326334
EST:     GCTTCTGGTTACTTTTTGGAGAAGGATTCTGTGAAAAAGGAGAAACATTT                         GCAATCTTTGAAATTGACTGAGGTGACTGTAAGTGACCAGCTTGAAGGTTT
genomic: GCTTCTGGTTACTTTTTGGAGAAGGATTCTGTGAAAAAGGAGAAACATTTgtaagtttct ... acattggcagGCAATCTTTGAAATTGACTGAGGTGACTGTAAGTGACCAGCTTGAAGGTTT
EST: gi|193684357|gb|FK621857.1|FK621857
EST:     GCTTCTGGTTACTTTTTGGAGAAGGATTCTGTGAAAAAGGAGAAACATTT                         GCAATCTTTGAAATTGACTGAGGTGACTGTAAGTGACCAGCTTGAAGGTTT
genomic: GCTTCTGGTTACTTTTTGGAGAAGGATTCTGTGAAAAAGGAGAAACATTTgtaagtttct ... acattggcagGCAATCTTTGAAATTGACTGAGGTGACTGTAAGTGACCAGCTTGAAGGTTT
EST: gi|207848798|gb|GD818829.1|GD818829
EST:     GCTTCTGGTTACTTTTTGGAGAAGGATTCTGTGAAAAAGGAGAAACATTT                         GCAATCTTTGAAATTGACTGAGGTGACTGTAAGTGAACCAGACTTAGAAGG
genomic: GCTTCTGGTTACTTTTTGGAGAAGGATTCTGTGAAAAAGGAGAAACATTTgtaagtttct ... acattggcagGCAATCTTTGAAATTGACTGAGGTGACTGTAAGTGA-CCAG-CTT-GAAGG
EST: gi|208098474|gb|GD896883.1|GD896883
EST:     GCTTCTGGTTACTTTT-GGAGAAGGATTCTGTGAAAAAGGAGAAACATTT                         GCAATCTTTGAAATTGACTGAGGTGACTGTAAGTG
genomic: GCTTCTGGTTACTTTTTGGAGAAGGATTCTGTGAAAAAGGAGAAACATTTgtaagtttct ... acattggcagGCAATCTTTGAAATTGACTGAGGTGACTGTAAGTG
EST: gi|193433071|gb|FK398719.1|FK398719
EST:     GCTTCTGGTTACTTTTTGGAGAAGGATTCTGTGAAAAAGGAGAAACATTT                         GCAATCTTTGAAATTGACTGAGGTGACTGTAAGTGACCAGCTTGAAGGTTT
genomic: GCTTCTGGTTACTTTTTGGAGAAGGATTCTGTGAAAAAGGAGAAACATTTgtaagtttct ... acattggcagGCAATCTTTGAAATTGACTGAGGTGACTGTAAGTGACCAGCTTGAAGGTTT
EST: gi|193710974|gb|FK644717.1|FK644717
EST:     GCTTCTGGTTACTTTTTGGAGAAGGATTCTGTGAAAAAGGAGAAACATTT                         GCAATCTTTGAAATTGACTGAGGTGACTGTAAGTGACCAGCTTGAAGGTTT
genomic: GCTTCTGGTTACTTTTTGGAGAAGGATTCTGTGAAAAAGGAGAAACATTTgtaagtttct ... acattggcagGCAATCTTTGAAATTGACTGAGGTGACTGTAAGTGACCAGCTTGAAGGTTT
EST: gi|193714379|gb|FK648930.1|FK648930
EST:     GCTTCTGGCTACTTTTTGGAGAAGGATTCTGTGAAAAAGGAGAAACATTT                         GCAATCTTTGAAATTGACTGAGGTGACTGTAAGTGACCAGCTTG
genomic: GCTTCTGGTTACTTTTTGGAGAAGGATTCTGTGAAAAAGGAGAAACATTTgtaagtttct ... acattggcagGCAATCTTTGAAATTGACTGAGGTGACTGTAAGTGACCAGCTTG
EST: gi|193355074|gb|FK321269.1|FK321269
EST:     CTTCTGGTTACTTTTTGGAGAAGGATTCTGTGAAAAAAGGAGAAACATTT                         GCAATCTTTGAAATTGACTGAGGTGACTGTAAGTGACCAGCTTGAAGGTTT
genomic: CTTCTGGTTACTTTTTGGAGAAGGATTCTGTGAAAAA-GGAGAAACATTTgtaagtttct ... acattggcagGCAATCTTTGAAATTGACTGAGGTGACTGTAAGTGACCAGCTTGAAGGTTT
EST: gi|193376901|gb|FK340536.1|FK340536
EST:     GCTTCTGGTTACTTTTTGGAGAAGGATTCTGTGAAAAAGGAGAAACATTT                         GCAATCTTTGAAATTGACTGAGGTGACTGTAAGTGACCAGCTTGAAGGTTT
genomic: GCTTCTGGTTACTTTTTGGAGAAGGATTCTGTGAAAAAGGAGAAACATTTgtaagtttct ... acattggcagGCAATCTTTGAAATTGACTGAGGTGACTGTAAGTGACCAGCTTGAAGGTTT
EST: gi|193560897|gb|FK519336.1|FK519336
EST:     GCTTCTGGTTACTTTTTGGAGAAGGATTCTGTGAAAA-GGAGAAACATTT                         GCAATCTTTGAAATTGACTGAGGTGACTGTAAGTGACCAGCTTGAAGGTTT
genomic: GCTTCTGGTTACTTTTTGGAGAAGGATTCTGTGAAAAAGGAGAAACATTTgtaagtttct ... acattggcagGCAATCTTTGAAATTGACTGAGGTGACTGTAAGTGACCAGCTTGAAGGTTT
EST: gi|208286773|gb|GE083807.1|GE083807
EST:     GCTTCTGGTTACTTTTTGGAGAAGGATTCTGTGAAAAAGGAGAAACATTT                         GCAATCTTTGAAATTGACTGAGGTGACTGTAAGTGACCAGCTTGAAGGTTT
genomic: GCTTCTGGTTACTTTTTGGAGAAGGATTCTGTGAAAAAGGAGAAACATTTgtaagtttct ... acattggcagGCAATCTTTGAAATTGACTGAGGTGACTGTAAGTGACCAGCTTGAAGGTTT
EST: gi|208276645|gb|GE074799.1|GE074799
EST:     GCTTCTGGTTACTTTTTGGAGAAGGATTCTGTGAAAAAGGAGAAACATTT                         GCAATCTTTGAAATTGACTGAGGTGACTGTAAGTGACCAGCTTGAAGGTTT
genomic: GCTTCTGGTTACTTTTTGGAGAAGGATTCTGTGAAAAAGGAGAAACATTTgtaagtttct ... acattggcagGCAATCTTTGAAATTGACTGAGGTGACTGTAAGTGACCAGCTTGAAGGTTT
EST: gi|207759138|gb|GD731705.1|GD731705
EST:     GCTTCTGGTTACTTTTTGGAGAAGGATTCTGTGAAAAAGGAGAAACATTT                         GCAATCTTTGAAATTGACTGAGGTGACTGTAAGTGACCAGCTTGAAGGTTT
genomic: GCTTCTGGTTACTTTTTGGAGAAGGATTCTGTGAAAAAGGAGAAACATTTgtaagtttct ... acattggcagGCAATCTTTGAAATTGACTGAGGTGACTGTAAGTGACCAGCTTGAAGGTTT
EST: gi|208245851|gb|GE050631.1|GE050631
EST:     GCTTCTGGTTACTTTTTGGAGAAGGATTCTGTGAAAAAGGAGAAACATTT                         GCAATCTTTGAAATTGACTGAGGTGACTGTAAGTGACCAGCTTGAAGGTTT
genomic: GCTTCTGGTTACTTTTTGGAGAAGGATTCTGTGAAAAAGGAGAAACATTTgtaagtttct ... acattggcagGCAATCTTTGAAATTGACTGAGGTGACTGTAAGTGACCAGCTTGAAGGTTT
EST: gi|208148516|gb|GD946352.1|GD946352
EST:     CTTTCTGGTTAC-CTTTGGAGAAGGATTCTGTGAAAAAGGAGAAACATTT                         GCAATCTTTGAAAATTGACTGAGGTGACTGTAAGTGACCAGCTTGAAGGTT
genomic: C-TTCTGGTTACTTTTTGGAGAAGGATTCTGTGAAAAAGGAGAAACATTTgtaagtttct ... acattggcagGCAATCTTTG-AAATTGACTGAGGTGACTGTAAGTGACCAGCTTGAAGGTT
EST: gi|193725217|gb|FK661079.1|FK661079
EST:     CTTCTGGTTACTTTTTTGGAGAAGGATTCTGTGAAAAAGGAGAAACATTT                         GCAATCTTTGAAATTGACTGAGGTGACTGTAAGTGACCAGCTTGAAGGTTT
genomic: CTTCTGGTTAC-TTTTTGGAGAAGGATTCTGTGAAAAAGGAGAAACATTTgtaagtttct ... acattggcagGCAATCTTTGAAATTGACTGAGGTGACTGTAAGTGACCAGCTTGAAGGTTT
EST: gi|208061639|gb|GD857183.1|GD857183
EST:     GCTTCTGGTTACTTTTTAGAGAAGGATTCTGTGAAAAAGGAGAAACATTT                         GCAATCTTTGAAATTGACTGAGGTGACTGTAAGTGACCAGCTTGAAGGTTT
genomic: GCTTCTGGTTACTTTTTGGAGAAGGATTCTGTGAAAAAGGAGAAACATTTgtaagtttct ... acattggcagGCAATCTTTGAAATTGACTGAGGTGACTGTAAGTGACCAGCTTGAAGGTTT
EST: gi|298167280|gb|HO010719.1|HO010719
EST:     GCTTCTGGTTACTTTTTGGAGAAGGATTCTGTGAAAAAGGAGAAACATTT                         GCAATCTTTGAAATTGACTGAGGTGACTGTAAGTGACCAGCTTGAAGGTTT
genomic: GCTTCTGGTTACTTTTTGGAGAAGGATTCTGTGAAAAAGGAGAAACATTTgtaagtttct ... acattggcagGCAATCTTTGAAATTGACTGAGGTGACTGTAAGTGACCAGCTTGAAGGTTT
EST: gi|208327414|gb|GE125394.1|GE125394
EST:     TTACTTTTTGGAGAAGGATTTCTTGTTGAAAAAGGAGAAACATTT                         GCAATCTTTGAAATTGACTGAGGTGACTGTAAGTGACCAGCTTGAAGGTTT
genomic: TTACTTTTTGGAGAAGGA-TTC-TG-TGAAAAAGGAGAAACATTTgtaagtttct ... acattggcagGCAATCTTTGAAATTGACTGAGGTGACTGTAAGTGACCAGCTTGAAGGTTT
EST: gi|193561153|gb|FK520218.1|FK520218
EST:     CTGGTTACTTTTTGGAGAAGGATTCTGTGAAAAAGGAGAAACATTT                         GCAATCTTTGAAATTGACTGAGGTGACTGTAAGTGACCAGCTTGAAGGTTT
genomic: CTGGTTACTTTTTGGAGAAGGATTCTGTGAAAAAGGAGAAACATTTgtaagtttct ... acattggcagGCAATCTTTGAAATTGACTGAGGTGACTGTAAGTGACCAGCTTGAAGGTTT
EST: gi|193407734|gb|FK372326.1|FK372326
EST:     GCTTCTGGTTACTTTTTGGAGAAGGATTCTGTGAAAAAGGAGAAACATTT                         GCAATCTTTGAAATTGACTGAGGTGACTGTAAGTGACCAGCTTGAAGGTTT
genomic: GCTTCTGGTTACTTTTTGGAGAAGGATTCTGTGAAAAAGGAGAAACATTTgtaagtttct ... acattggcagGCAATCTTTGAAATTGACTGAGGTGACTGTAAGTGACCAGCTTGAAGGTTT
EST: gi|208277405|gb|GE081216.1|GE081216
EST:     GCTTCTGGTTACTTTTTGGAGAAGGATTCTGTGAAAAAGGAGAAACATTT                         GCAATCTTTGAAATTGACTGAGGTGACTGTAAGTGACCAGCTTGAAGGTTT
genomic: GCTTCTGGTTACTTTTTGGAGAAGGATTCTGTGAAAAAGGAGAAACATTTgtaagtttct ... acattggcagGCAATCTTTGAAATTGACTGAGGTGACTGTAAGTGACCAGCTTGAAGGTTT
EST: gi|193545653|gb|FK502690.1|FK502690
EST:     GCTTCTGGTTACTTTTTGGAGAAGGATACTGTGAAAAAGGAGAAACATTT                         GCAATCTTTGAAATTGACTGAGGTGACTGTAAGTGACCAGCTTGAAGGTTT
genomic: GCTTCTGGTTACTTTTTGGAGAAGGATTCTGTGAAAAAGGAGAAACATTTgtaagtttct ... acattggcagGCAATCTTTGAAATTGACTGAGGTGACTGTAAGTGACCAGCTTGAAGGTTT
EST: gi|23057556|gb|BU578230.1|BU578230
EST:     GCTTCTGGTTACTTTTTGGAGAAGGATTCTGTGAAAAAGGAGAAACATTT                         GCAATCTTTGAAATTGACTGAGGTGACTGTAAGTGACCAGCTTGAAGGTTT
genomic: GCTTCTGGTTACTTTTTGGAGAAGGATTCTGTGAAAAAGGAGAAACATTTgtaagtttct ... acattggcagGCAATCTTTGAAATTGACTGAGGTGACTGTAAGTGACCAGCTTGAAGGTTT
EST: gi|193573859|gb|FK529233.1|FK529233
EST:     GCTTCTGGTTACTTTTTGGAGAAGGATTCTGTGAAAAAGGAGAAACATTT                         GCAATCTTTGAAATTGACTGAGGTGACTGTAAGTGACCAGCTTGAAGGTTT
genomic: GCTTCTGGTTACTTTTTGGAGAAGGATTCTGTGAAAAAGGAGAAACATTTgtaagtttct ... acattggcagGCAATCTTTGAAATTGACTGAGGTGACTGTAAGTGACCAGCTTGAAGGTTT
EST: gi|207777665|gb|GD746688.1|GD746688
EST:     TTTTTGGAGAAGGATTCTGTG-AAAAGGAGAAACATTT                         GCAATCTTTGAAATTGACTGAGGTGACTGTAAGTGACCAGCTTGAAGGTTT
genomic: TTTTTGGAGAAGGATTCTGTGAAAAAGGAGAAACATTTgtaagtttct ... acattggcagGCAATCTTTGAAATTGACTGAGGTGACTGTAAGTGACCAGCTTGAAGGTTT
EST: gi|193530131|gb|FK486162.1|FK486162
EST:     GCTTCTGGTTACTTTTTGGAGAAGGATTCTGTGAAAAAGGAGAAACATTT                         GCAATTCTTTTGAAATTGACTGAGGTGACTGTAAGTGACCAGCTTGAAGGT
genomic: GCTTCTGGTTACTTTTTGGAGAAGGATTCTGTGAAAAAGGAGAAACATTTgtaagtttct ... acattggcagGCAAT-CTTT-GAAATTGACTGAGGTGACTGTAAGTGACCAGCTTGAAGGT
EST: gi|207799895|gb|GD771036.1|GD771036
EST:     GCTTCTGGTTACTTTTTGGAGAAGGATTCTGTGAAAAAGGAGAAACATTT                         GCAATCTTTGAAATTGACTGAGGTGACTGTAAGTGACCAGCTTGAAGGTTT
genomic: GCTTCTGGTTACTTTTTGGAGAAGGATTCTGTGAAAAAGGAGAAACATTTgtaagtttct ... acattggcagGCAATCTTTGAAATTGACTGAGGTGACTGTAAGTGACCAGCTTGAAGGTTT
EST: gi|193353273|gb|FK316045.1|FK316045
EST:     GCTTCTGGTTACTTTTTGGAGAAGGATTCTGTGAAAAAGGAGAAACATTT                         GCAATCTTTGAAATTGACTGAGGGTGACTGTAA
genomic: GCTTCTGGTTACTTTTTGGAGAAGGATTCTGTGAAAAAGGAGAAACATTTgtaagtttct ... acattggcagGCAATCTTTGAAATTGACTGAGG-TGACTGTAA
EST: gi|208067081|gb|GD866863.1|GD866863
EST:     GCTTCTGGTTACTTTTTGGAGAAGGATTCTGTGAAAAAGGAGAAACATTT                         GCAATCTTTGAAATTGACTGAGGTGACTGTAAGTGACCAGCTTGAAGGTTT
genomic: GCTTCTGGTTACTTTTTGGAGAAGGATTCTGTGAAAAAGGAGAAACATTTgtaagtttct ... acattggcagGCAATCTTTGAAATTGACTGAGGTGACTGTAAGTGACCAGCTTGAAGGTTT
EST: gi|207786242|gb|GD758649.1|GD758649
EST:     GCTTCTGGTTACTTTTTGGAGAAGGATTCTGTGAAAAAGGAGAAACATTT                         GCAATCTTTGAAATTGACTGAGGTGACTGTAAGTGACCAGCTTGAAGGTTT
genomic: GCTTCTGGTTACTTTTTGGAGAAGGATTCTGTGAAAAAGGAGAAACATTTgtaagtttct ... acattggcagGCAATCTTTGAAATTGACTGAGGTGACTGTAAGTGACCAGCTTGAAGGTTT
EST: gi|193469517|gb|FK435919.1|FK435919
EST:     GCTTCTGGTTAC-TTTTGGAGAAGGATTCTGTGAAAAAGGAGAAACATTT                         GCAATCTTTGAAATTGACTGAGGTGACTGTAAGTGACCAGCTTGAAGGTTT
genomic: GCTTCTGGTTACTTTTTGGAGAAGGATTCTGTGAAAAAGGAGAAACATTTgtaagtttct ... acattggcagGCAATCTTTGAAATTGACTGAGGTGACTGTAAGTGACCAGCTTGAAGGTTT
EST: gi|193537111|gb|FK498850.1|FK498850
EST:     GCTTCTGGTTACTTTTTGGAGAAGGATTCTGTGAAAAAGGAGAAACATTT                         GCAATCTTTGAAATTGACTGAGGTGACTGTAAGTGACCAGCTTGAAGGTTT
genomic: GCTTCTGGTTACTTTTTGGAGAAGGATTCTGTGAAAAAGGAGAAACATTTgtaagtttct ... acattggcagGCAATCTTTGAAATTGACTGAGGTGACTGTAAGTGACCAGCTTGAAGGTTT
EST: gi|308222672|gb|HO760582.1|HO760582
EST:     GCTTCTGGTTACTTTTTGGAGAAGGATTCTGTGAAAAAGGAGAAACATTT                         GCAATCTTTGAAATTGACTGAGGTGACTGTAAGTGACCAGCTTGAAGGTTT
genomic: GCTTCTGGTTACTTTTTGGAGAAGGATTCTGTGAAAAAGGAGAAACATTTgtaagtttct ... acattggcagGCAATCTTTGAAATTGACTGAGGTGACTGTAAGTGACCAGCTTGAAGGTTT
EST: gi|308222671|gb|HO760581.1|HO760581
EST:     GCTTCTGGTTACTTTTTGGAGAAGGATTCTGTGAAAAAGGAGAAACATTT                         GCAATCTTTGAAATTGACTGAGGTGACTGTAAGTGACCAGCTTGAAGGTTT
genomic: GCTTCTGGTTACTTTTTGGAGAAGGATTCTGTGAAAAAGGAGAAACATTTgtaagtttct ... acattggcagGCAATCTTTGAAATTGACTGAGGTGACTGTAAGTGACCAGCTTGAAGGTTT
EST: gi|193489305|gb|FK455336.1|FK455336
EST:     GCTTCTGGTTACTTTTTGGAGAAGGATTCTGTGAAAAAGGAGAAACATTT                         GCAATCTTTGAAATTGACTGAGGTGACTGTAAGTGACCAGCTTGAAGGTTT
genomic: GCTTCTGGTTACTTTTTGGAGAAGGATTCTGTGAAAAAGGAGAAACATTTgtaagtttct ... acattggcagGCAATCTTTGAAATTGACTGAGGTGACTGTAAGTGACCAGCTTGAAGGTTT
EST: gi|193493840|gb|FK458462.1|FK458462
EST:     GCTTCTGGTTACTTTTTGGAGAAGGATTCTGTGAAAAAGGAGAAACATTT                         GCAATCTTTGAAATTGACTGAGGTGACTGTAAGTGACCAGCTTGAAGGTTT
genomic: GCTTCTGGTTACTTTTTGGAGAAGGATTCTGTGAAAAAGGAGAAACATTTgtaagtttct ... acattggcagGCAATCTTTGAAATTGACTGAGGTGACTGTAAGTGACCAGCTTGAAGGTTT
EST: gi|207834791|gb|GD808582.1|GD808582
EST:     CTTCTGGTTACTTTTTGGAGAAGGATTCTGTGAAAAAGGGAGAAACATTT                         A
genomic: CTTCTGGTTACTTTTTGGAGAAGGATTCTGTGAAAAAGG-AGAAACATTTgtaagtttct ... acattggcag-
EST: gi|207834791|gb|GD808582.1|GD808582
EST:     CTTCTGGTTACTTTTTGGAGAAGGATTCTGTGAAAAAGGGAGAAACATTT                         A
genomic: CTTCTGGTTACTTTTTGGAGAAGGATTCTGTGAAAAAGG-AGAAACATTTgtaagtttct ... acattggcag-
EST: gi|207828028|gb|GD798843.1|GD798843
EST:     CTTCTGGTTACTTTTTGAAGAAGGATTCTGTGAAAAAAGGAGAAACATTT                         GCAATCTTTGAAATTGACTGAGGTGACTGTAAGTGACCAGCTTGAAGGTTT
genomic: CTTCTGGTTACTTTTTGGAGAAGGATTCTGTG-AAAAAGGAGAAACATTTgtaagtttct ... acattggcagGCAATCTTTGAAATTGACTGAGGTGACTGTAAGTGACCAGCTTGAAGGTTT
EST: gi|193406402|gb|FK373051.1|FK373051
EST:     GCTTCTGGTTACTTTTTGGAGAAGGATTCTGTGAAAAAGGAGAAACATTT                         GCAATCTTTGAAATTGACTGAGGTGACTGTAAGTGACCAGCTTGAAGGTTT
genomic: GCTTCTGGTTACTTTTTGGAGAAGGATTCTGTGAAAAAGGAGAAACATTTgtaagtttct ... acattggcagGCAATCTTTGAAATTGACTGAGGTGACTGTAAGTGACCAGCTTGAAGGTTT
EST: gi|208301071|gb|GE100738.1|GE100738
EST:     GCTTCTGGTTACTTCTTGGAGAAGGATTCTGTGAAAAAGGAGAAACATTT                         GCAATCTTTGAAATTGACTGAGGTGACTGTAAGTGACCAGCTTGAAGGTTT
genomic: GCTTCTGGTTACTTTTTGGAGAAGGATTCTGTGAAAAAGGAGAAACATTTgtaagtttct ... acattggcagGCAATCTTTGAAATTGACTGAGGTGACTGTAAGTGACCAGCTTGAAGGTTT
EST: gi|208259214|gb|GE055464.1|GE055464
EST:     TCTGGTTACTTTTTGGAGAAGGATTCTGTGAAAAAGGAGAAACATTT                         GCAATCTTTGAAATTGACTGAGGTGACTGTAAGTGACCAGCTTGAAGGTTT
genomic: TCTGGTTACTTTTTGGAGAAGGATTCTGTGAAAAAGGAGAAACATTTgtaagtttct ... acattggcagGCAATCTTTGAAATTGACTGAGGTGACTGTAAGTGACCAGCTTGAAGGTTT
EST: gi|193455332|gb|FK419715.1|FK419715
EST:     GCTTCTGGTTACTTTTTGGAGAAGGATTCTGTG-AAAAGGAGAAACATTT                         GCAATCTTTGAAATTGACTGAGGTGACTGTAAGTGACCAGCTTGAAGGTTT
genomic: GCTTCTGGTTACTTTTTGGAGAAGGATTCTGTGAAAAAGGAGAAACATTTgtaagtttct ... acattggcagGCAATCTTTGAAATTGACTGAGGTGACTGTAAGTGACCAGCTTGAAGGTTT
EST: gi|207801754|gb|GD772970.1|GD772970
EST:     TTTTTGGAGAAGGATTCTGTGAAAAAGGAGAAACATTT                         GCAATCTTTGAAATTGACTGAGGTGACTGTAAGTGACCAGCTTGAAGGTTT
genomic: TTTTTGGAGAAGGATTCTGTGAAAAAGGAGAAACATTTgtaagtttct ... acattggcagGCAATCTTTGAAATTGACTGAGGTGACTGTAAGTGACCAGCTTGAAGGTTT
EST: gi|193510295|gb|FK469817.1|FK469817
EST:     GCTTCTGGTTACTTTTTGGAGAAGGATTCTGTGAAAAAGGAGAAACATTT                         GCAATCTTTGAAATTGACTGAGGTGACTGTAAGTGACCAGCTTGAAGGTTT
genomic: GCTTCTGGTTACTTTTTGGAGAAGGATTCTGTGAAAAAGGAGAAACATTTgtaagtttct ... acattggcagGCAATCTTTGAAATTGACTGAGGTGACTGTAAGTGACCAGCTTGAAGGTTT
EST: gi|6502373|gb|AW203746.1|AW203746
EST:     GCTTCTGGTTACTTTTTGGAGAAGGATTCTGTGAAAAAGGAGATACATNT                         GCAATCTTTGAAATTGACTGAGGTGACTGTAAGTGACCAGCTTGA
genomic: GCTTCTGGTTACTTTTTGGAGAAGGATTCTGTGAAAAAGGAGAAACATTTgtaagtttct ... acattggcagGCAATCTTTGAAATTGACTGAGGTGACTGTAAGTGACCAGCTTGA
EST: gi|9820374|gb|BE555884.1|BE555884
EST:     GCTTCTGGTTACTTNTTGGAGAAGGATTCTGTGAAAAAGGAGAAACATTT                         T
genomic: GCTTCTGGTTACTTTTTGGAGAAGGATTCTGTGAAAAAGGAGAAACATTTgtaagtttct ... acattggcag-
EST: gi|9820374|gb|BE555884.1|BE555884
EST:     GCTTCTGGTTACTTNTTGGAGAAGGATTCTGTGAAAAAGGAGAAACATTT                         T
genomic: GCTTCTGGTTACTTTTTGGAGAAGGATTCTGTGAAAAAGGAGAAACATTTgtaagtttct ... acattggcag-
EST: gi|208283994|gb|GE087720.1|GE087720
EST:     AAAAAGGAGAAACATTT                         GCAATCTTTGAAATTGACTGAGGTGACTGTAAGTGACCAGCTTGAAGGTTT
genomic: AAAAAGGAGAAACATTTgtaagtttct ... acattggcagGCAATCTTTGAAATTGACTGAGGTGACTGTAAGTGACCAGCTTGAAGGTTT
EST: gi|208341760|gb|GE139442.1|GE139442
EST:     GCTTCTGGTTACTTTTTGGAGAAGGATTCTGTGAAAAAGGAGAAACATTT                         GCAATCTTTGAAATTGACTGAGGTGACTGTAAGTGACCAGCTTGAAGGTTT
genomic: GCTTCTGGTTACTTTTTGGAGAAGGATTCTGTGAAAAAGGAGAAACATTTgtaagtttct ... acattggcagGCAATCTTTGAAATTGACTGAGGTGACTGTAAGTGACCAGCTTGAAGGTTT
EST: gi|193340716|gb|FK308337.1|FK308337
EST:     TCTGGTTACTTTTTGGAGAAGGATTACTAGTAGAAAAAGGAGAAACATTT                         GCAATCTTTGAAATTGACTGAGGTGACTGTAAGTGACCAGCTTGAAGGTTT
genomic: TCTGGTTACTTTTTGGAGAAGGATT-CT-GT-GAAAAAGGAGAAACATTTgtaagtttct ... acattggcagGCAATCTTTGAAATTGACTGAGGTGACTGTAAGTGACCAGCTTGAAGGTTT
EST: gi|193419187|gb|FK382739.1|FK382739
EST:     GCTTCTGGTTACTTTTTGGAGAAGGATTCTGTGAAAAAGGAGAAACATTT                         GCAATCTTTGAAATTGACTGAGGTGACTGTAAGTGACCAGCTTGAAGGTTT
genomic: GCTTCTGGTTACTTTTTGGAGAAGGATTCTGTGAAAAAGGAGAAACATTTgtaagtttct ... acattggcagGCAATCTTTGAAATTGACTGAGGTGACTGTAAGTGACCAGCTTGAAGGTTT
EST: gi|193530935|gb|FK487512.1|FK487512
EST:     GCTTCTGGTTACTTTTTGGAGAAGGATTCTGTGAAAAAGGAGAAACATTT                         GCAATCTTTGAAATTGACTGAGGTGACTGTAAGTGACCAGCTTGAAGGTTT
genomic: GCTTCTGGTTACTTTTTGGAGAAGGATTCTGTGAAAAAGGAGAAACATTTgtaagtttct ... acattggcagGCAATCTTTGAAATTGACTGAGGTGACTGTAAGTGACCAGCTTGAAGGTTT
EST: gi|254337587|gb|GR849433.1|GR849433
EST:     GCTTCTGGTTACTTTTTGGAGAAGGATTCTGTGAAAAAGGAGAAACATTT                         GCAATCTTTGAAATTGACTGAGGTGACTGTAAGTGACCAGCTTGAAGGTTT
genomic: GCTTCTGGTTACTTTTTGGAGAAGGATTCTGTGAAAAAGGAGAAACATTTgtaagtttct ... acattggcagGCAATCTTTGAAATTGACTGAGGTGACTGTAAGTGACCAGCTTGAAGGTTT
EST: gi|207688857|gb|GD671796.1|GD671796
EST:     TTACTTTTTGGAGAAGGATTCTGTGAAAAAGGAGAAACATTT                         GCAATCTTTGAAACTGACTGAGGTGACTGTAAGTGACCAGCTTGAAGGTTT
genomic: TTACTTTTTGGAGAAGGATTCTGTGAAAAAGGAGAAACATTTgtaagtttct ... acattggcagGCAATCTTTGAAATTGACTGAGGTGACTGTAAGTGACCAGCTTGAAGGTTT
EST: gi|15001132|gb|BI321946.1|BI321946
EST:     GCTTCTGGTTACTTTTTGGAGAAGGATTCTGTGAAAAAGGAGAAACATTT                         GCAATCTTTGAAATTGACTGAGGTGACTGTAAGTGACCAGCTTGAAGGTTT
genomic: GCTTCTGGTTACTTTTTGGAGAAGGATTCTGTGAAAAAGGAGAAACATTTgtaagtttct ... acattggcagGCAATCTTTGAAATTGACTGAGGTGACTGTAAGTGACCAGCTTGAAGGTTT
EST: gi|208176280|gb|GD978571.1|GD978571
EST:     GCTTCTGGTTACTTTTTGGAGAAGGATTCTGTGAAAAAGGAGAAACATTT                         GCAATCTTTGAAATTGACTGAGGTGACTGTAAGTGACCAGCTTGAAGGTTT
genomic: GCTTCTGGTTACTTTTTGGAGAAGGATTCTGTGAAAAAGGAGAAACATTTgtaagtttct ... acattggcagGCAATCTTTGAAATTGACTGAGGTGACTGTAAGTGACCAGCTTGAAGGTTT
EST: gi|193471297|gb|FK438190.1|FK438190
EST:     GCTTCTGGTTACTTTTTGGAGAAGGATTCTGTGAAAAAGGAGAAACATTT                         GCAATCTTTGAAATTGACTGAGGTGACTGTAAGTGACCAGCTTGAAGGTTT
genomic: GCTTCTGGTTACTTTTTGGAGAAGGATTCTGTGAAAAAGGAGAAACATTTgtaagtttct ... acattggcagGCAATCTTTGAAATTGACTGAGGTGACTGTAAGTGACCAGCTTGAAGGTTT
EST: gi|193369519|gb|FK333995.1|FK333995
EST:     TTCTGGTTACTTTTTTGGTAGAAGGATTCTGTG-AAAAGGAGAAACATTT                         GCAATCTTTGAAATTGACTGAGGTGACTGTAAGTGACCAGCTTGAAGGTTT
genomic: TTCTGGTTAC-TTTTTGG-AGAAGGATTCTGTGAAAAAGGAGAAACATTTgtaagtttct ... acattggcagGCAATCTTTGAAATTGACTGAGGTGACTGTAAGTGACCAGCTTGAAGGTTT
EST: gi|193500825|gb|FK464944.1|FK464944
EST:     GCTTCTGGTTACTTTTTGGAGAAGGATTCTGTGAAAAAGGAGAAACATTT                         GCAATCTTTGAAATTGACTGAGGTGACTGTAAGTGACCAGCTTGAAGGTTT
genomic: GCTTCTGGTTACTTTTTGGAGAAGGATTCTGTGAAAAAGGAGAAACATTTgtaagtttct ... acattggcagGCAATCTTTGAAATTGACTGAGGTGACTGTAAGTGACCAGCTTGAAGGTTT
EST: gi|15337002|gb|BI497658.1|BI497658
EST:     GCTTCTGGTTACTTTTTGGAGAAGGATTCTGTGAAAAAGGAGAAACATTT                         GCAATCTTTGAAATTGACTGAGGTGACTGTAAGTGACCAGCTTGAAGGTTT
genomic: GCTTCTGGTTACTTTTTGGAGAAGGATTCTGTGAAAAAGGAGAAACATTTgtaagtttct ... acattggcagGCAATCTTTGAAATTGACTGAGGTGACTGTAAGTGACCAGCTTGAAGGTTT
EST: gi|193428687|gb|FK394111.1|FK394111
EST:     TTCTTGGTTTACTTTTTGGAGAAGGATTCTGTGAAAAAGGAGAAACATTT                         GCAATCTTTGAAATTGACTGAGGTGACTGTAAGTGACCAGCTTGAAGGTTT
genomic: TTC-TGG-TTACTTTTTGGAGAAGGATTCTGTGAAAAAGGAGAAACATTTgtaagtttct ... acattggcagGCAATCTTTGAAATTGACTGAGGTGACTGTAAGTGACCAGCTTGAAGGTTT
EST: gi|193651184|gb|FK598975.1|FK598975
EST:     GCTTCTGGTTACTTTTTGGAGAAGGATTCTGTGAAAAAGGAGAAACATTT                         GCAATCTTTGAAATTGACTGAGGTGACTGTAAGTGACCAGCTTGAAGGTTT
genomic: GCTTCTGGTTACTTTTTGGAGAAGGATTCTGTGAAAAAGGAGAAACATTTgtaagtttct ... acattggcagGCAATCTTTGAAATTGACTGAGGTGACTGTAAGTGACCAGCTTGAAGGTTT
EST: gi|193562556|gb|FK517771.1|FK517771
EST:     TTACTTTTTGGAGAAGGATTCTGTGAAAAAGGAGAAACATTT                         GCAATCTTTGAAATTGACTGAGGTGACTGTAAGTGACCAGCTTGAAGGTTT
genomic: TTACTTTTTGGAGAAGGATTCTGTGAAAAAGGAGAAACATTTgtaagtttct ... acattggcagGCAATCTTTGAAATTGACTGAGGTGACTGTAAGTGACCAGCTTGAAGGTTT
EST: gi|207728837|gb|GD708259.1|GD708259
EST:     GCTTCTGGTTACTTTTTGGAGAAGGATTCTGTGAAAAAGGAGAAACATTT                         GCAATCTTTGAAATTGACTGAGGTGACTGTAAGTGACCAG
genomic: GCTTCTGGTTACTTTTTGGAGAAGGATTCTGTGAAAAAGGAGAAACATTTgtaagtttct ... acattggcagGCAATCTTTGAAATTGACTGAGGTGACTGTAAGTGACCAG
EST: gi|298186383|gb|HO037016.1|HO037016
EST:     GCTTCTGGTTACTTTTTGGAGAAGGATTCTGTGAAAAAGGAGAAACATTT                         GCAATCTTTGAAATTGACTGAGGTGACTGTAAGTGACCAGCTTGAAGGTTT
genomic: GCTTCTGGTTACTTTTTGGAGAAGGATTCTGTGAAAAAGGAGAAACATTTgtaagtttct ... acattggcagGCAATCTTTGAAATTGACTGAGGTGACTGTAAGTGACCAGCTTGAAGGTTT
EST: gi|193531419|gb|FK490917.1|FK490917
EST:     GCTTCTGGTTACTTTTTGGAGAAGGATTCTGTGAAAAAGGAGAAACATTT                         GCAATCTTTGAAATTGACTGAGGTGACTGTAAGTGACCAGCTTGAAGGTTT
genomic: GCTTCTGGTTACTTTTTGGAGAAGGATTCTGTGAAAAAGGAGAAACATTTgtaagtttct ... acattggcagGCAATCTTTGAAATTGACTGAGGTGACTGTAAGTGACCAGCTTGAAGGTTT
EST: gi|207791863|gb|GD765002.1|GD765002
EST:     GGAGAAACATTT                         GCAATCTTTGAAATTGACTGAGGTGACTGTAAGTGACCAGCTTGAAGGTTT
genomic: GGAGAAACATTTgtaagtttct ... acattggcagGCAATCTTTGAAATTGACTGAGGTGACTGTAAGTGACCAGCTTGAAGGTTT
EST: gi|5753558|gb|AI960845.1|AI960845
EST:     GCTTCTGGTTACTTTTTGGAGAAGGATTCTGTGAAAAAGGAGAAACATTT                         GCAATCTTTGAAATTGACTGAGGTGACTGTAAGTGACCAGCTTGAAGGTTT
genomic: GCTTCTGGTTACTTTTTGGAGAAGGATTCTGTGAAAAAGGAGAAACATTTgtaagtttct ... acattggcagGCAATCTTTGAAATTGACTGAGGTGACTGTAAGTGACCAGCTTGAAGGTTT
EST: gi|7588809|gb|AW704596.1|AW704596
EST:     GCTTCTGGTTACTTTTTGGAGAAGGATTCTGTGAAAAAGGAGAAACATTT                         GCAATCTTTGAAATTGACTGAGGTGACTGTAAGTGACCAGCTTGAAGGTTT
genomic: GCTTCTGGTTACTTTTTGGAGAAGGATTCTGTGAAAAAGGAGAAACATTTgtaagtttct ... acattggcagGCAATCTTTGAAATTGACTGAGGTGACTGTAAGTGACCAGCTTGAAGGTTT
EST: gi|193660306|gb|FK603860.1|FK603860
EST:     GCTTCTGGTTACTTTTTGGAGAAGGATTCTGTGAAAAAGGAGAAACATTT                         GCAATCTTTGAAATTGACTGAGGTGACTGTAAGTGACCAGCTTGAAGGTTT
genomic: GCTTCTGGTTACTTTTTGGAGAAGGATTCTGTGAAAAAGGAGAAACATTTgtaagtttct ... acattggcagGCAATCTTTGAAATTGACTGAGGTGACTGTAAGTGACCAGCTTGAAGGTTT
EST: gi|254327081|gb|GR836690.1|GR836690
EST:     GCTTCTGGTTACTTTTTGGAGAAGGATTCTGTGAAAAAGGAGAAACATTT                         GCAATCTTTGAAATTGACTGAGGTGACTGTAAGTGACCAGCTTGAAAGGTT
genomic: GCTTCTGGTTACTTTTTGGAGAAGGATTCTGTGAAAAAGGAGAAACATTTgtaagtttct ... acattggcagGCAATCTTTGAAATTGACTGAGGTGACTGTAAGTGACCAGCTTGAA-GGTT
EST: gi|193351366|gb|FK315038.1|FK315038
EST:     GCTTCTGGTTACTTTTTGGAGAAGGATTCTGTGAAAAAGGAGAAACATTT                         GCAAATCTTTGAAATTGACTGAGGTGACTGTAAGTGACCAGCTTGAAGGTT
genomic: GCTTCTGGTTACTTTTTGGAGAAGGATTCTGTGAAAAAGGAGAAACATTTgtaagtttct ... acattggcagGC-AATCTTTGAAATTGACTGAGGTGACTGTAAGTGACCAGCTTGAAGGTT
EST: gi|193342495|gb|FK306111.1|FK306111
EST:     CTTCTGGTTACTTTTTGGTAGAAGGATTCTGTGAAAAAGGAGAAACATTT                         GCAATCTTTGAAATTGACTGAGGTGACTGTAAGTGACCAGCTTGAAGGTTT
genomic: CTTCTGGTTACTTTTTGG-AGAAGGATTCTGTGAAAAAGGAGAAACATTTgtaagtttct ... acattggcagGCAATCTTTGAAATTGACTGAGGTGACTGTAAGTGACCAGCTTGAAGGTTT
EST: gi|193371457|gb|FK336942.1|FK336942
EST:     GCTTCTGGTTACTTTTTGGAGAAGGATTCTGTGAAAA-GGAGAAACATTT                         GCAATCTTTGAAATTGACTGAGGTGACTGTAAGTGACCAGCTTGAAGGTTT
genomic: GCTTCTGGTTACTTTTTGGAGAAGGATTCTGTGAAAAAGGAGAAACATTTgtaagtttct ... acattggcagGCAATCTTTGAAATTGACTGAGGTGACTGTAAGTGACCAGCTTGAAGGTTT
EST: gi|9902696|gb|BE611664.1|BE611664
EST:     GCTTCTGGTTACTTTTTGGAGAAGGATTCTGTGAAAAAGGAGAAACATTT                         GCAATCTTTGAAATTGACTGAGGTGACTGTAAGTGACCAGCTTGAAGGTTT
genomic: GCTTCTGGTTACTTTTTGGAGAAGGATTCTGTGAAAAAGGAGAAACATTTgtaagtttct ... acattggcagGCAATCTTTGAAATTGACTGAGGTGACTGTAAGTGACCAGCTTGAAGGTTT
EST: gi|15286677|gb|BI470568.1|BI470568
EST:     GCTTCTGGTTACTTTTTGGAGAAGGATTCTGTGAAAAAGGAGAAACATTT                         GCAATCTTTGAAATTGACTGAGGTGACTGTAAGTGACCAGCTTGAAGGTTT
genomic: GCTTCTGGTTACTTTTTGGAGAAGGATTCTGTGAAAAAGGAGAAACATTTgtaagtttct ... acattggcagGCAATCTTTGAAATTGACTGAGGTGACTGTAAGTGACCAGCTTGAAGGTTT
EST: gi|208137910|gb|GD938462.1|GD938462
EST:     TTTTGGAGAAGGATTCTGTGAAAAAGGAGAAACATTT                         GCAATCTTTGAAATTGACTGAGGTGACTGTAAGTGACCAGCTTGAAGGTTT
genomic: TTTTGGAGAAGGATTCTGTGAAAAAGGAGAAACATTTgtaagtttct ... acattggcagGCAATCTTTGAAATTGACTGAGGTGACTGTAAGTGACCAGCTTGAAGGTTT

Putative cis-regulatory sequences

 atgc intron ATGC exonic elements by Pertea et al.
 ATGC exon atgc putative intronic elements
 ATGC putative exonic elements identified for retained introns
        10        20        30        40        50        60        70        80        90        100       110       120       130       140       150       160       170       180       190       200       210       220 
---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| 
ATGCAGGATATTTATGGAGCTTCTGGTTACTTTTTGGAGAAGGATTCTGTGAAAAAGGAGAAACATTTgtaagtttcttctcaattttgagctgtcctcatcttttgacatggttattaaatatacctctgggaaagttgggacaaggttggcaagttggttttaatt

- - - - - - - - - - - - - - - -  TTGGAG
- - - - - - - - - - - - - - - - - TGGAGA
- - - - - - - - - - - - - - - - -  GGAGAA
- - - - - - - - - - - - - - - - - - - - - - - - - - - AAGGAG
- - - - - - - - - - - - - - - - - - - - - - - - - - -  AGGAGA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - GGAGAA