1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' |
TCAACTCAGAGGAGCGGTAACAGCCTGGCAGCCCAGGTCTGTTTTTTTCTCCCTCCCTGTCTCTTGCAAGTGTGTATAGAAGCTTCTTCACCTTGGCCGGgtaattccttccccaagtgacacacagtccaaacttccaaaaccgtaataattattttgtcatagtctatgttctgttgtaatagtctcataagtgtttg...
species | Glycine max |
transcript | GLYMA01G37760.1 |
intron # | 8 |
splice site | 5' |
intron type | U2 |
EST: CCCTCCCTGTCTCTTGCAAGTGTGTATAGAAGCTTCTTCACCTTGGCCGG GGTTTAGTGATCCAGATGAATCCTCAGGGCCTTTGAAAAGATCCAGATGAAEST: gi|207713742|gb|GD694857.1|GD694857
genomic: CCCTCCCTGTCTCTTGCAAGTGTGTATAGAAGCTTCTTCACCTTGGCCGGgtaattcctt ... ttaatgatagGGTTTAGTGATCCAGATGAATCCTCAGGGCCTTTGAAAAGATCCAGATGAA
EST: CCCTCCCTGTCTCTTGCAAGTGTGTATAGAAGCTTCTTCACCTTGGCCGG GGTTTAGTGATCCAGATGAATCCTCAGGGCCTTTGAAAAGATCCAGATGAAEST: gi|208127409|gb|GD924469.1|GD924469
genomic: CCCTCCCTGTCTCTTGCAAGTGTGTATAGAAGCTTCTTCACCTTGGCCGGgtaattcctt ... ttaatgatagGGTTTAGTGATCCAGATGAATCCTCAGGGCCTTTGAAAAGATCCAGATGAA
EST: CCCTCCCTGTCTCTTGCAAGTGTGTATAGAAGCTTCTTCACCTTGGCCGG GGTTTAGTGATCCAGATGAATCCTCAGGGCCTTTGAAAAGATCCAGATGAAEST: gi|207754839|gb|GD728342.1|GD728342
genomic: CCCTCCCTGTCTCTTGCAAGTGTGTATAGAAGCTTCTTCACCTTGGCCGGgtaattcctt ... ttaatgatagGGTTTAGTGATCCAGATGAATCCTCAGGGCCTTTGAAAAGATCCAGATGAA
EST: CCCTCCCTGTCTCTTGCAAGTGTGTATAGAAGCTTCTTCACCTTGGCCGG GGTTTAGTGATCCAGATGAATCCTCAGGGCCTTTGAAAAGATCCAGATGAAEST: gi|207746073|gb|GD717799.1|GD717799
genomic: CCCTCCCTGTCTCTTGCAAGTGTGTATAGAAGCTTCTTCACCTTGGCCGGgtaattcctt ... ttaatgatagGGTTTAGTGATCCAGATGAATCCTCAGGGCCTTTGAAAAGATCCAGATGAA
EST: CCCTCCCTGTCTCTTGCAAGTGTGTATAGAAGCTTCTTCACCTTGGCCGG GGTTTAGTGATCCAGATGAATCCTCAGGGCCTTTGAAAAGATCCAGATGAA
genomic: CCCTCCCTGTCTCTTGCAAGTGTGTATAGAAGCTTCTTCACCTTGGCCGGgtaattcctt ... ttaatgatagGGTTTAGTGATCCAGATGAATCCTCAGGGCCTTTGAAAAGATCCAGATGAA
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| TCAACTCAGAGGAGCGGTAACAGCCTGGCAGCCCAGGTCTGTTTTTTTCTCCCTCCCTGTCTCTTGCAAGTGTGTATAGAAGCTTCTTCACCTTGGCCGGgtaattccttccccaagtgacacacagtccaaacttccaaaaccgtaataattattttgtcatagtctatgttctgttgtaatagtctcataagtgtttg
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AGAAGC
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -cttcccc