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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

TTGTTGGCTTTATTGTTGGAGTAGTTCCCCAGATACGTAAATTGATGATTGGCGGCGATGCTTCACTTCATGTGATTCAGGACTCAGTTACCATGGTTGGgtatgtatgcatcccaaaacttgtttttgatttgaaattacacaaggccgtcgggagtagttatgtgtttccattttttaatttcaattctaattttagt...

Basic information

species Glycine max
transcript GLYMA01G36030.1
intron # 8
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|33390187|gb|CA853394.1|CA853394
EST:     GGCGGCGATGCTTCACTTCATGTGATTCAGGACTCAGTTACCATGGTTGG                         TGAAGCAGCCGTCCCAGTTATAACCCTTATAATGGGAGCAAACCTCCTTAA
genomic: GGCGGCGATGCTTCACTTCATGTGATTCAGGACTCAGTTACCATGGTTGGgtatgtatgc ... ttacatgcagTGAAGCAGCCGTCCCAGTTATAACCCTTATAATGGGAGCAAACCTCCTTAA
EST: gi|13478700|gb|BG508070.1|BG508070
EST:     GGCGGCGATGCTTCACTTCATGTGATTCAGGACTCAGTTACCATGGTTGG                         TGAAGCAGCCGTCCCAGTTATAACCCTTATAATGGGAGCAAACCTCCTTAA
genomic: GGCGGCGATGCTTCACTTCATGTGATTCAGGACTCAGTTACCATGGTTGGgtatgtatgc ... ttacatgcagTGAAGCAGCCGTCCCAGTTATAACCCTTATAATGGGAGCAAACCTCCTTAA
EST: gi|21994213|gb|BQ785741.1|BQ785741
EST:     GGCGGCGATGCTTCACTTCATGTGATTCAGGACTCAGTTACCATGGTTGG                         TGAAGCAGCCGTCCCAGTTATAACCCTTATAATGGGAGCAAACCTCCTTAA
genomic: GGCGGCGATGCTTCACTTCATGTGATTCAGGACTCAGTTACCATGGTTGGgtatgtatgc ... ttacatgcagTGAAGCAGCCGTCCCAGTTATAACCCTTATAATGGGAGCAAACCTCCTTAA
EST: gi|33390321|gb|CA853516.1|CA853516
EST:     GGCGGCGATGCTTCACTTCATGTGATTCAGGACTCAGTTACCATGGTTGG                         TGAAGCAGCCGTCCCAGTTATAACCCTTATAATGGGAGCAAACCTCCTTAA
genomic: GGCGGCGATGCTTCACTTCATGTGATTCAGGACTCAGTTACCATGGTTGGgtatgtatgc ... ttacatgcagTGAAGCAGCCGTCCCAGTTATAACCCTTATAATGGGAGCAAACCTCCTTAA