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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

GCTGAGACAACATGGGCACTAACAGTTCTAGGGTATCTGGCAAAATTTGTTTTGGGCATTTTAGGgtaagcaatggcatataacaatctgagttgcttggaatgcttgatgctgtatgaccccttatacatagttttacatattttcttctttcatcatcgaata...

Basic information

species Glycine max
transcript GLYMA01G30400.1
intron # 8
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|7924521|gb|AW830547.1|AW830547
EST:     GCACTAACAGTTCTAGGGTATCTGGCAAAATTTGTTTTGGGCATTTTAGG                         GTTTATCGTTTCTGTGGCATGGGTTGCTCATATCATTATCTATCTATTAAT
genomic: GCACTAACAGTTCTAGGGTATCTGGCAAAATTTGTTTTGGGCATTTTAGGgtaagcaatg ... actgtgccagGTTTATCGTTTCTGTGGCATGGGTTGCTCATATCATTATCTATCTATTAAT
EST: gi|9204679|gb|BE330903.1|BE330903
EST:     GCTCTAACAGTTCTAGGGTATCTGGCAAAATTTGTTTTGGGCATTTTAGG                         GTTTATCGTTTCTGTGGCATGGGTTGCTCATATCATTATCTATCTATTAAT
genomic: GCACTAACAGTTCTAGGGTATCTGGCAAAATTTGTTTTGGGCATTTTAGGgtaagcaatg ... actgtgccagGTTTATCGTTTCTGTGGCATGGGTTGCTCATATCATTATCTATCTATTAAT
EST: gi|23057508|gb|BU578182.1|BU578182
EST:     GCACTAACAGTTCTAGGGTATCTGGCAAAATTTGTTTTGGGCATTTTAGG                         GTTTATCGTTTCTGTGGCATGGGTTGCTCATATCATTATC
genomic: GCACTAACAGTTCTAGGGTATCTGGCAAAATTTGTTTTGGGCATTTTAGGgtaagcaatg ... actgtgccagGTTTATCGTTTCTGTGGCATGGGTTGCTCATATCATTATC
EST: gi|17022512|gb|BM093546.1|BM093546
EST:     GCACTAACAGTTCTAGGGTATCTGGCAAAATTTGTTTTGGGCATTTTAGG                         GTTTATCGTTTCTGTGGCATGGGTTGCTCATATCATTATCTATCTATTAAT
genomic: GCACTAACAGTTCTAGGGTATCTGGCAAAATTTGTTTTGGGCATTTTAGGgtaagcaatg ... actgtgccagGTTTATCGTTTCTGTGGCATGGGTTGCTCATATCATTATCTATCTATTAAT