1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' |
AAAATTCTCATCATATTATTGAGGCAACCTTCAAAGCTTTTGCTCGGGCTCTTCGACAAGCAACAGAGTATGATCCACGTCGCCGTGGAACTATACCAAGgtatggtatctttgaaattgccttttgattttgtgggtagacgagaattagattttattcactttattatttgctgctagtattacttgaaaaccatttt...
species | Glycine max |
transcript | GLYMA20G28420.2 |
intron # | 7 |
splice site | 5' |
intron type | U2 |
EST: CTTCGACAAGCAACAGAGTATGATCCACGTCGCCGTGGAACTATACCAAG TTCGAAAGGGGTTCTGTCCCGTAGCTAATATTTTTCTGGCGGTGGACCTTCEST: gi|58021912|gb|CX708653.1|CX708653
genomic: CTTCGACAAGCAACAGAGTATGATCCACGTCGCCGTGGAACTATACCAAGgtatggtatc ... ctatgtgcagTTCGAAAGGGGTTCTGTCCCGTAGCTAATATTTTTCTGGCGGTGGACCTTC
EST: CTTCGACAAGCAACAGAGTATGATCCACGTCGCCGTGGAACTATACCAAG TTCGAAAGGGGTTCTGTCCCGTAGCTAATATTTTTCTGGCGGTGGACCTTCEST: gi|16278546|gb|BI942961.1|BI942961
genomic: CTTCGACAAGCAACAGAGTATGATCCACGTCGCCGTGGAACTATACCAAGgtatggtatc ... ctatgtgcagTTCGAAAGGGGTTCTGTCCCGTAGCTAATATTTTTCTGGCGGTGGACCTTC
EST: CTTCGACAAGCAACAGAGTATGATCCACGTCGCCGTGGAACTATACCAAG TTCGAAAGGGGTTCTGTCCCGTAGCTAATATTTTTCTGGCGGTGGACCTTCEST: gi|207814614|gb|GD788523.1|GD788523
genomic: CTTCGACAAGCAACAGAGTATGATCCACGTCGCCGTGGAACTATACCAAGgtatggtatc ... ctatgtgcagTTCGAAAGGGGTTCTGTCCCGTAGCTAATATTTTTCTGGCGGTGGACCTTC
EST: CGTCGCCGTGGAACTATACCAAG TTCGAAAGGGGTTCTGTCCCGTAGCTAATATTTTTCTGGCGGTGGACCTTCEST: gi|120528942|gb|EH257076.1|EH257076
genomic: CGTCGCCGTGGAACTATACCAAGgtatggtatc ... ctatgtgcagTTCGAAAGGGGTTCTGTCCCGTAGCTAATATTTTTCTGGCGGTGGACCTTC
EST: CTTCGACAAGCAACAGAGTATGATCCACGTCGCCGTGGAACTATACCAAG TTCGAAAGGGGTTCTGTCCCGTAGCTAATATTTTTCTGGCGGTGGACCTTCEST: gi|16278135|gb|BI942744.1|BI942744
genomic: CTTCGACAAGCAACAGAGTATGATCCACGTCGCCGTGGAACTATACCAAGgtatggtatc ... ctatgtgcagTTCGAAAGGGGTTCTGTCCCGTAGCTAATATTTTTCTGGCGGTGGACCTTC
EST: CTTCGACAAGCAACAGAGTATGATCCACGTCGCCGTGGAACTATACCAAG TTCGAAAGGGGTTCTGTCCCGTAGCTAATATTTNTCTGGCGGTGGACCTTCEST: gi|16105448|gb|BI893188.1|BI893188
genomic: CTTCGACAAGCAACAGAGTATGATCCACGTCGCCGTGGAACTATACCAAGgtatggtatc ... ctatgtgcagTTCGAAAGGGGTTCTGTCCCGTAGCTAATATTTTTCTGGCGGTGGACCTTC
EST: CTTCGACAAGCAACAGAGTATGATCCACGTCGCCGTGGAACTATACCAAG TTCGAAAGGGGTTCTGTCCCGTAGCTAATATTTTTCTGGCGGTGGACCTTCEST: gi|209713507|gb|BW679284.1|BW679284
genomic: CTTCGACAAGCAACAGAGTATGATCCACGTCGCCGTGGAACTATACCAAGgtatggtatc ... ctatgtgcagTTCGAAAGGGGTTCTGTCCCGTAGCTAATATTTTTCTGGCGGTGGACCTTC
EST: CTTCGACAAGCAACAGAGTATGATCCACGTCGCCGTGGAACTATACCAAG TTCGAAAGGGGTTCTGTCCCGTAGCTAATATTTTTCTGGCGGTGGACCTTC
genomic: CTTCGACAAGCAACAGAGTATGATCCACGTCGCCGTGGAACTATACCAAGgtatggtatc ... ctatgtgcagTTCGAAAGGGGTTCTGTCCCGTAGCTAATATTTTTCTGGCGGTGGACCTTC
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| AAAATTCTCATCATATTATTGAGGCAACCTTCAAAGCTTTTGCTCGGGCTCTTCGACAAGCAACAGAGTATGATCCACGTCGCCGTGGAACTATACCAAGgtatggtatctttgaaattgccttttgattttgtgggtagacgagaattagattttattcactttattatttgctgctagtattacttgaaaaccatttt
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