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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

GGCAAAATAGAAAGCCTTGCTACCAAACAACAGTGCACTCCTTCCCAGTTGGCACTAGCATGGGTGCTCCACCAAGGCAATGATGTTGTGCCTATTCCCGgtgagtgacaatatatatatatatatatatatatatatatatattttcctattttaaatttataaagtgataaaatgtcttaattaacaaactgactaca...

Basic information

species Glycine max
transcript GLYMA19G43360.1
intron # 7
splice site 5'
intron type U2

Orthologous splice sites


 atgc   intronic sequence     ATGC   exonic sequence


upper sequence: GLYMA19G43360.1 (Glycine max), 5'ss of exon 7
lower sequence: Vv14s0030g01960.t01 (Vitis vinifera), 5'ss of exon 6
GGCAAAATAGAAAGCCTTGCTACCAAACAACAGTGCACTCCTTCCCAGTTGGCACTAGCATGGGTGCTCCACCAAGGCAATGATGTTGTGCCTATTCCCGgtgagtgacaatatatatatatatatatatatatatatatatattttcctattttaaatt-tataaagtgataaa-atgtcttaattaacaaactgactaca
     |||||||| |||||| |  || ||    || |||||| | ||  | |||||||||||||| ||||| |||||  |||||||||| ||||| || ||||||| ||    | | | | ||  | |||  || ||| |  ||    | || | |  |  |||| |   | | | || || |  ||   |   | |  | |
ACTCGAATAGAAAACCTTGCAAATAAGCATGGTTGTACTCCTGCTCAACTAGCACTAGCATGGGTTCTCCAACAAGGGGATGATGTTGTACCTATACCTGgtgagtcacttcctctttttctacct-tattaatctattttaatcaggccatgtcatttgatatatatgtacatatatatcctgtttgg-attttaaggaaa