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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

GTGATAATTAACAGGGACAATCTGGTTAAACTACTGGCCAAACACACGGGAAATgtgagtatcatgcacaggtactagatgtcatatataattcagggaagatgaggtaaaatctaatttctgttatttgcttctttctaaattactag

Basic information

species Glycine max
transcript GLYMA19G42180.1
intron # 7
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|193368025|gb|FK331591.1|FK331591
EST:     AACACACGGGAAAT                         TCAGAGGAAACAGTTGCTAATGTGATGAAGAGACCATATTATATGGATGCA
genomic: AACACACGGGAAATgtgagtatca ... aaattactagTCAGAGGAAACAGTTGCTAATGTGATGAAGAGACCATATTATATGGATGCA
EST: gi|208288911|gb|GE085344.1|GE085344
EST:     ATTAACAGGGACAATCTGGTTAAACTACTGGCCAAACAACAACGGGAAAT                         TCAGAGGAAACAGTTGCTAATGTGATGAAGAGACCATATTATATGGATGC
genomic: ATTAACAGGGACAATCTGGTTAAACTACTGGCCAAAC-AC-ACGGGAAATgtgagtatca ... aaattactagTCAGAGGAAACAGTTGCTAATGTGATGAAGAGACCATATTATATGGATGC