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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

TTGTGCGTCCAGATCTTTTCACATACAAGAAGGGGGTAGTGAGGGTAGAGACACAAGGCATCTGTGTTGGGCACACACTTCTGGACCAAGGATTGAAAAAgtttgtccaaatttaaaactattattattcactctaatttttccttataatttagtgctcaacataattggattcattcatgcag

Basic information

species Glycine max
transcript GLYMA19G37830.2
intron # 7
splice site 5'
intron type U2

Orthologous splice sites


 atgc   intronic sequence     ATGC   exonic sequence


upper sequence: GLYMA19G37830.1 (Glycine max), 5'ss of exon 8
lower sequence: Vv08s0007g03690.t01 (Vitis vinifera), 5'ss of exon 8
TTGTGCGTCCAGATCTTTTCACATACAAGAAGGGGGTAGTGAGGGTAGAGACACAAGGCATCTGTGTTGGGCACACACTTCTGGACCAAGGATTGAAAAAgtttgtccaaatttaaa-actattattatt-cactctaatttttccttataatttagtgctcaacataattggattcattcatgcag
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TGGTCCGGCCTGATCTCTTTACATACAAGGAGGGAGTAGTGAGGGTTGAGACACAGGGAATATGTTTGGGCCATACACTGATGGACCAAGGACTAAAAATgtattttcaaactaatgcgttcttataagtgcatttcagctttttctattaatt--gcattgattatg-tctaatgatttgatgcag