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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

GCTTCTGGGAATGCAGAGAAGGCAAGGCAGATTCTAGTTGAGGGGCTTGAGAATGTTTTGTTGTCAAAGCCACTACTTGAGgtctgtccttacttttactttccattgccctctagattcactcttattatgtagttggcgatttttctcttcgtatttctaagtgttcctcatctcttaatgagattctttaattcattgttacatgcag

Basic information

species Glycine max
transcript GLYMA19G35140.3
intron # 7
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|9259181|gb|BE347328.1|BE347328
EST:     TTCTAGTTGAGGGGCTTGAGAATGTTTTGTTGTCAAAGCCACTACTTGAG                         GCTTTATTGCATTTTGAGGCTATTCAACCTTTGCCAAAGCGTGTTGGTGTC
genomic: TTCTAGTTGAGGGGCTTGAGAATGTTTTGTTGTCAAAGCCACTACTTGAGgtctgtcctt ... ttacatgcagGCTTTATTGCATTTTGAGGCTATTCAACCTTTGCCAAAGCGTGTTGGTGTC
EST: gi|8283952|gb|BE021511.1|BE021511
EST:     TTCTAGTTGAGGGGCTTGAGAATGTTTTGTTGTCAAAGCCACTACTTGAG                         GCTTTATTGCATTTTGAGGCTATTCAACCTTTGCCAAAGCGTGTTGGTGTC
genomic: TTCTAGTTGAGGGGCTTGAGAATGTTTTGTTGTCAAAGCCACTACTTGAGgtctgtcctt ... ttacatgcagGCTTTATTGCATTTTGAGGCTATTCAACCTTTGCCAAAGCGTGTTGGTGTC
EST: gi|151410949|gb|EV280764.1|EV280764
EST:     GGGGCTTGAGAATGTTTTGTTGTCAAAGCCACTACTTGAG                         GCTTTATTGCATTTTGAGGCTATTCAACCTTTGCCAAAGCGTGTTGGTGTC
genomic: GGGGCTTGAGAATGTTTTGTTGTCAAAGCCACTACTTGAGgtctgtcctt ... ttacatgcagGCTTTATTGCATTTTGAGGCTATTCAACCTTTGCCAAAGCGTGTTGGTGTC
EST: gi|21256538|gb|BQ453426.1|BQ453426
EST:     TTCTAGTTGAGGGGCTTGAGAATGTTTTGTTGTCAAAGCCACTACTTGAG                         GCTTTATTGCATTTTGAGGCTATTCAACCTTTGCCAAAGCGTGTTGGTGTC
genomic: TTCTAGTTGAGGGGCTTGAGAATGTTTTGTTGTCAAAGCCACTACTTGAGgtctgtcctt ... ttacatgcagGCTTTATTGCATTTTGAGGCTATTCAACCTTTGCCAAAGCGTGTTGGTGTC