1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' |
ACTGCTTACAATGTTGTTGCTTACAAGGATAAACCACGTTTGAAGAGTGCTGTAGAAATGCTTAAAACTACCGAAGAAATAGAACAGCGATTGAAAGAAgtatattttgatcttctggcttatctaaactaggtggttggagttggtgaaaattttggtaaaagttataggtttaaaaaggtcataagtttatgtggca...
species | Glycine max |
transcript | GLYMA19G06470.2 |
intron # | 7 |
splice site | 5' |
intron type | U2 |
EST: CTGTAGAAATGCTTAAAACTACCGAAGAAATAGAACAGCGATTGAAAGAA GTTTCTCTACCAATATTCATCCTTCACGGGGAAGCTGACACTGTGACTGATEST: gi|192321511|gb|FK011769.1|FK011769
genomic: CTGTAGAAATGCTTAAAACTACCGAAGAAATAGAACAGCGATTGAAAGAAgtatattttg ... gtgattacagGTTTCTCTACCAATATTCATCCTTCACGGGGAAGCTGACACTGTGACTGAT
EST: CTGTAGAAATGCTTAAAACTACCGAAGAAATAGAACAGCGATTGAAAGAA GTTTCTCTACCAATATTCATCCTTCACGGGGAAGCTGACACTGTGACTGATEST: gi|14205613|gb|BG839291.1|BG839291
genomic: CTGTAGAAATGCTTAAAACTACCGAAGAAATAGAACAGCGATTGAAAGAAgtatattttg ... gtgattacagGTTTCTCTACCAATATTCATCCTTCACGGGGAAGCTGACACTGTGACTGAT
EST: CTGTAGAAATGCTTAAAACTACCGAAGAAATAGAACAGCGATTGAAAGAA GTTTCTCTACCAATATTCATCCTTCACGGGGAAGCTGACACTGTGACTGAT
genomic: CTGTAGAAATGCTTAAAACTACCGAAGAAATAGAACAGCGATTGAAAGAAgtatattttg ... gtgattacagGTTTCTCTACCAATATTCATCCTTCACGGGGAAGCTGACACTGTGACTGAT
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| ACTGCTTACAATGTTGTTGCTTACAAGGATAAACCACGTTTGAAGAGTGCTGTAGAAATGCTTAAAACTACCGAAGAAATAGAACAGCGATTGAAAGAAgtatattttgatcttctggcttatctaaactaggtggttggagttggtgaaaattttggtaaaagttataggtttaaaaaggtcataagtttatgtggca
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - CGAAGA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AAGAAA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AAAGAA