1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' |
GTCACGCAAGATGGTAAATACTGTTTGGTTTTAGTTTTTGAGGCCAAGGCTCTGCAGTTGTCAGATTTTGAACAAAGACAGgtattcagctttctttcctggagcatatatttttaattatataaattttattttatttcatttttttcacatgttcatgaagataatgggactctttgga...
species | Glycine max |
transcript | GLYMA19G06090.2 |
intron # | 7 |
splice site | 5' |
intron type | U2 |
EST: TAGTTTTTGAGGCCAAGGCTCTGCAGTTGTCAGATTTTGAACAAAGACAG GCCAAATTTACTTCATTCTTTGGGCCAGGAATTACAGCTGAGATTGEST: gi|5509244|gb|AI855802.1|AI855802
genomic: TAGTTTTTGAGGCCAAGGCTCTGCAGTTGTCAGATTTTGAACAAAGACAGgtattcagct ... ttgtgtttagGCCAAATTTACTTCATTCTTTGGGCCAGGAATTACAGCTGAAATTG
EST: TAGTTTTTGAGGCCAAGGCTCTGCAGTTGTCAGATTTTGAACAAAGACAG GCCAAATTTACTTCATTCTTTGGGCCAGGAATTACAGCTGAAATTGEST: gi|14206191|gb|BG839869.1|BG839869
genomic: TAGTTTTTGAGGCCAAGGCTCTGCAGTTGTCAGATTTTGAACAAAGACAGgtattcagct ... ttgtgtttagGCCAAATTTACTTCATTCTTTGGGCCAGGAATTACAGCTGAAATTG
EST: TAGTTTTTGAGGCCAAGGCTCTGCAGTTGTCAGATTTTGAACAAAGACAG GCCAAATTTACTTCATTCTTTGGGCCAGGAATTACAGCTGAAATTGEST: gi|51338338|gb|CO982204.1|CO982204
genomic: TAGTTTTTGAGGCCAAGGCTCTGCAGTTGTCAGATTTTGAACAAAGACAGgtattcagct ... ttgtgtttagGCCAAATTTACTTCATTCTTTGGGCCAGGAATTACAGCTGAAATTG
EST: TAGTTTTTGAGGCCAAGGCTCTGCAGTTGTCAGATTTTGAACAAAGACAG GCCAAATTTACTTCATTCTTTGGGCCAGGAATTACAGCTGAAATTGEST: gi|163923391|gb|EH039694.1|EH039694
genomic: TAGTTTTTGAGGCCAAGGCTCTGCAGTTGTCAGATTTTGAACAAAGACAGgtattcagct ... ttgtgtttagGCCAAATTTACTTCATTCTTTGGGCCAGGAATTACAGCTGAAATTG
EST: TAGTTTTTGAGGCCAAGGCTCTGCAGTTGTCAGATTTTGAACAAAGACAG GCCAAATTTACTTCATTCTTTGGGCCAGGAATTACAGCTGAAATTGEST: gi|15287963|gb|BI471854.1|BI471854
genomic: TAGTTTTTGAGGCCAAGGCTCTGCAGTTGTCAGATTTTGAACAAAGACAGgtattcagct ... ttgtgtttagGCCAAATTTACTTCATTCTTTGGGCCAGGAATTACAGCTGAAATTG
EST: TAGTTTTTGAGGCCAAGGCTCTGCAGTTGTCAGATTTTGAACAAAGACAG GCCAAATTTACTTCATTCTTTGGGCCAGGAATTACAGCTGAAATTG
genomic: TAGTTTTTGAGGCCAAGGCTCTGCAGTTGTCAGATTTTGAACAAAGACAGgtattcagct ... ttgtgtttagGCCAAATTTACTTCATTCTTTGGGCCAGGAATTACAGCTGAAATTG
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| GTCACGCAAGATGGTAAATACTGTTTGGTTTTAGTTTTTGAGGCCAAGGCTCTGCAGTTGTCAGATTTTGAACAAAGACAGgtattcagctttctttcctggagcatatatttttaattatataaattttattttatttcatttttttcacatgttcatgaagataatgggactctttgga
- - - - - - - - - - - - - - - - - - - - - - - - - CTGCAG