Skip to another splice site:
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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

GTGAAATTGATCGCTATGCAAGTGATAATGTTAACAAGCTTTTGGTTGGAAACAAGTGTGATCTGGAAGCAAATAGAGCTGTGTCATATGAAACAGCTAAagtatagctttgttgcacatcccttgaatttttcattttttcatataaagtttcaaacttttgttcatgattagatctgttgggttattaggattttattcctattccagcttcccttacccccatctttaatatttgttttttctttgaca

Basic information

species Glycine max
transcript GLYMA18G48610.1
intron # 7
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|207729729|gb|GD707793.1|GD707793
EST:     AAGCAAATAGAGCTGTGTCATATGAAACAGCTAA                         AGCATTCGCAGATGAAATAGGTATACCTTTTATGGAAACAAGTGCAAAAGA
genomic: AAGCAAATAGAGCTGTGTCATATGAAACAGCTAAagtatagctt ... ttctttgacaGGCATTCGCAGATGAAATAGGCATACCTTTTATGGAAACAAGTGCAAAAGA
EST: gi|21993817|gb|BQ785345.1|BQ785345
EST:     AACAAGTGTGATCTGGAAGCAAATAGAGCTGTGTCATATGAAACAGCTAA                         AGCATTCGCAGATGAAATAGGCATACCTTTTATGGAAACAAGTGCAAAAGA
genomic: AACAAGTGTGATCTGGAAGCAAATAGAGCTGTGTCATATGAAACAGCTAAagtatagctt ... ttctttgacaGGCATTCGCAGATGAAATAGGCATACCTTTTATGGAAACAAGTGCAAAAGA
EST: gi|193656389|gb|FK602861.1|FK602861
EST:     AACAAGTGTGATCTGGAAGCAAATAGAGCTGTGTCATATGAAACAGCTAA                         AGCATTCGCAGATGAAATAGGCATACCTTTTATGGAAACAAGTGCAAAAGA
genomic: AACAAGTGTGATCTGGAAGCAAATAGAGCTGTGTCATATGAAACAGCTAAagtatagctt ... ttctttgacaGGCATTCGCAGATGAAATAGGCATACCTTTTATGGAAACAAGTGCAAAAGA
EST: gi|213615420|gb|DB965506.1|DB965506
EST:     AACAAGTGTGATCTGGGAGCAAATAGAGCTGTGTCATATGAAACAGCTAA                         AGCATTCGCAGATGAAATAGGCATACCTTTTATGGAAAC
genomic: AACAAGTGTGATCTGGAAGCAAATAGAGCTGTGTCATATGAAACAGCTAAagtatagctt ... ttctttgacaGGCATTCGCAGATGAAATAGGCATACCTTTTATGGAAAC
EST: gi|193441345|gb|FK406022.1|FK406022
EST:     AACAAGTGTGATCTGGAAGCAAATAGAGCTGTGTCATATGAAACAGCTAA                         AGCATTCGCAG
genomic: AACAAGTGTGATCTGGAAGCAAATAGAGCTGTGTCATATGAAACAGCTAAagtatagctt ... ttctttgacaGGCATTCGCAG
EST: gi|208263190|gb|GE064262.1|GE064262
EST:     AACAAGTGTGATCTGGAAGCAAATAGAGCTGTGTCATATGAAACAGCTAA                         AGCATTCGCAG
genomic: AACAAGTGTGATCTGGAAGCAAATAGAGCTGTGTCATATGAAACAGCTAAagtatagctt ... ttctttgacaGGCATTCGCAG
EST: gi|298174542|gb|HO017765.1|HO017765
EST:     AACAAGTGTGATCTGGAAGCAAATAGAGCTGTGTCATATGAAACAGCTAA                         AGCATTCGCAGA
genomic: AACAAGTGTGATCTGGAAGCAAATAGAGCTGTGTCATATGAAACAGCTAAagtatagctt ... ttctttgacaGGCATTCGCAGA
EST: gi|193440765|gb|FK409586.1|FK409586
EST:     AACAAGTGTGATCTGGAAGCAAATAGAGCTGTGTCATATGAAACAGCTAA                         AGCATTCGCAGATGAAATAGGCATACCTTTTATGGAAACAAGTGCAAAAGA
genomic: AACAAGTGTGATCTGGAAGCAAATAGAGCTGTGTCATATGAAACAGCTAAagtatagctt ... ttctttgacaGGCATTCGCAGATGAAATAGGCATACCTTTTATGGAAACAAGTGCAAAAGA
EST: gi|208029945|gb|GD827451.1|GD827451
EST:     AACAAGTGTGATCTGGAAGCAAATAGAGCTGTGTCATATGAAACAGCTAA                         AGCATTCGCAGATG
genomic: AACAAGTGTGATCTGGAAGCAAATAGAGCTGTGTCATATGAAACAGCTAAagtatagctt ... ttctttgacaGGCATTCGCAGATG
EST: gi|208253436|gb|GE051144.1|GE051144
EST:     AACAAGTGTGATCTGGAAGCAAATAGAGCTGTGTCATATGAAACAGCTAA                         AGCGTTCGCAGATGAAATAGGCATACCTTTTATGGAAACAAGTGCAAAAGA
genomic: AACAAGTGTGATCTGGAAGCAAATAGAGCTGTGTCATATGAAACAGCTAAagtatagctt ... ttctttgacaGGCATTCGCAGATGAAATAGGCATACCTTTTATGGAAACAAGTGCAAAAGA
EST: gi|193728384|gb|FK666372.1|FK666372
EST:     AACAAGTGTGATCTGGAAGCAAATAGAGCTGTGTCATATGAAACAGCTAA                         AGCATTCGCAGATGAAATAGGCATACCTTTTATGGAAACAAGTGCAAAAGA
genomic: AACAAGTGTGATCTGGAAGCAAATAGAGCTGTGTCATATGAAACAGCTAAagtatagctt ... ttctttgacaGGCATTCGCAGATGAAATAGGCATACCTTTTATGGAAACAAGTGCAAAAGA
EST: gi|207807437|gb|GD777086.1|GD777086
EST:     AACAAGTGTGATCTGGAAGCAAATAGAGCTGTGTCATATGAAACAGCTAA                         AGCATTCGCAGATGAAATAGGCATACCTTTTA
genomic: AACAAGTGTGATCTGGAAGCAAATAGAGCTGTGTCATATGAAACAGCTAAagtatagctt ... ttctttgacaGGCATTCGCAGATGAAATAGGCATACCTTTTA
EST: gi|207847654|gb|GD818245.1|GD818245
EST:     AACAAGTGTGATCTGGAAGCAAATAGAGCTGTGTCATATGAAACAGCTAA                         AGCATTCGCAG
genomic: AACAAGTGTGATCTGGAAGCAAATAGAGCTGTGTCATATGAAACAGCTAAagtatagctt ... ttctttgacaGGCATTCGCAG
EST: gi|208276973|gb|GE073434.1|GE073434
EST:     AACAAGTGTGGTCTGGAAGCAAATAGAGCTGTGTCATATGAAACAGCTAA                         AGCATTCGCAGATGAAATAGGCATACCTTTTATGGAAACAAGTGCAAAAGA
genomic: AACAAGTGTGATCTGGAAGCAAATAGAGCTGTGTCATATGAAACAGCTAAagtatagctt ... ttctttgacaGGCATTCGCAGATGAAATAGGCATACCTTTTATGGAAACAAGTGCAAAAGA
EST: gi|193607568|gb|FK557447.1|FK557447
EST:     AACAAGTGTGATCTGGAAGCAAATAGAGCTGTGTCATATGAAACAGCTAA                         AGCATTCGCAGATGAAATAGGCATACCTTTTATGGAAACAAGTGCAAAAGA
genomic: AACAAGTGTGATCTGGAAGCAAATAGAGCTGTGTCATATGAAACAGCTAAagtatagctt ... ttctttgacaGGCATTCGCAGATGAAATAGGCATACCTTTTATGGAAACAAGTGCAAAAGA
EST: gi|8403151|gb|BE058785.1|BE058785
EST:     AACAAGTGTGATCTGGAAGCAAATAGAGCTGTGTCATATGAAACAGCTAA                         AGCATTCGCAGATGAAATAGGCATACCTTTTATGGAAACAAGTGCAGAAGA
genomic: AACAAGTGTGATCTGGAAGCAAATAGAGCTGTGTCATATGAAACAGCTAAagtatagctt ... ttctttgacaGGCATTCGCAGATGAAATAGGCATACCTTTTATGGAAACAAGTGCAAAAGA
EST: gi|208105066|gb|GD907395.1|GD907395
EST:     AACAAGTGTGATCTGGAAGCAAATAGAGCTGTGTCATATGAAACAGCTAA                         AGCATTCGCAGATGAAATAGGCATACCTTTTATGGAAACAAGTGCAAAAGA
genomic: AACAAGTGTGATCTGGAAGCAAATAGAGCTGTGTCATATGAAACAGCTAAagtatagctt ... ttctttgacaGGCATTCGCAGATGAAATAGGCATACCTTTTATGGAAACAAGTGCAAAAGA
EST: gi|193495583|gb|FK462839.1|FK462839
EST:     AACAAGTGTGATCTGGAAGCAAATAGAGCTGTGTCATATGAAACAGCTAA                         AGCATTCGCAGATGAAATAGGCATACCTTTTATAGGAAAACAAGTGCAAAA
genomic: AACAAGTGTGATCTGGAAGCAAATAGAGCTGTGTCATATGAAACAGCTAAagtatagctt ... ttctttgacaGGCATTCGCAGATGAAATAGGCATACCTTTTAT-GGAAA-CAAGTGCAAAA
EST: gi|208311328|gb|GE108592.1|GE108592
EST:     TATGAAACAGCTAA                         AGCATTCGCAGATGAAATAGGCATACCTTTTATTGGTAAACAAGTGCAAAA
genomic: TATGAAACAGCTAAagtatagctt ... ttctttgacaGGCATTCGCAGATGAAATAGGCATACCTTTTA-TGG-AAACAAGTGCAAAA
EST: gi|207818769|gb|GD791584.1|GD791584
EST:     AACAAGTGTGATCTGGAAGCAAATAGAGCTGTGTCATATGAAACAGCTAA                         AGCATTCGCAGATGAAATAAGGACATACCTTTTATGG
genomic: AACAAGTGTGATCTGGAAGCAAATAGAGCTGTGTCATATGAAACAGCTAAagtatagctt ... ttctttgacaGGCATTCGCAGATGAAATA-GG-CATACCTTTTATGG
EST: gi|193650993|gb|FK599364.1|FK599364
EST:     AACAAGTGTGATCTGGAAGCAAATAGAGCTGTGTCATATGAAACAGCTAA                         AGCATTCGCAGATGAAATAGGCATACCTTTTATGGAAACAAGTGCAAAAGA
genomic: AACAAGTGTGATCTGGAAGCAAATAGAGCTGTGTCATATGAAACAGCTAAagtatagctt ... ttctttgacaGGCATTCGCAGATGAAATAGGCATACCTTTTATGGAAACAAGTGCAAAAGA
EST: gi|213619737|gb|DB967359.1|DB967359
EST:     AACAAGTGTGATCTGGAAGCAAATAGAGCTGTGTCATATGAAACAGCTAA                         AGCATTCGCAGATGAAATAGGCATACCTTTTATGGAAACAAGTGCAAAAGA
genomic: AACAAGTGTGATCTGGAAGCAAATAGAGCTGTGTCATATGAAACAGCTAAagtatagctt ... ttctttgacaGGCATTCGCAGATGAAATAGGCATACCTTTTATGGAAACAAGTGCAAAAGA
EST: gi|151404575|gb|EV274389.1|EV274389
EST:     AACAAGTGTGATCTGGAAGCAAATAGAGCTGTGTCATATGAAACAGCTAA                         AGCATTCGCAGATGAAATAGGCATACCTTTTATGGAAACAAGTGCAAAAGA
genomic: AACAAGTGTGATCTGGAAGCAAATAGAGCTGTGTCATATGAAACAGCTAAagtatagctt ... ttctttgacaGGCATTCGCAGATGAAATAGGCATACCTTTTATGGAAACAAGTGCAAAAGA
EST: gi|208199249|gb|GD999518.1|GD999518
EST:     AACAAGTGTGATCTGGAAGCAAATAGAGCTGTGTCATATGAAACAGCTAA                         AGCATTCGCAGATGAAATAGGCATACCTTTTATGGAAACAAGTGCAAAAGA
genomic: AACAAGTGTGATCTGGAAGCAAATAGAGCTGTGTCATATGAAACAGCTAAagtatagctt ... ttctttgacaGGCATTCGCAGATGAAATAGGCATACCTTTTATGGAAACAAGTGCAAAAGA
EST: gi|207731210|gb|GD708867.1|GD708867
EST:     AACAAGTGTGATCTGGAAGCAAATAGAGCTGTGTCATATGAAACAGCTAA                         AGCATTCGCAGATGAAATAGGCATACCTTTTATGGAAACAAGTGCAAAAGA
genomic: AACAAGTGTGATCTGGAAGCAAATAGAGCTGTGTCATATGAAACAGCTAAagtatagctt ... ttctttgacaGGCATTCGCAGATGAAATAGGCATACCTTTTATGGAAACAAGTGCAAAAGA
EST: gi|208296613|gb|GE089713.1|GE089713
EST:     CAAATAGAGCTGTGTCATATGAAACAGCTAA                         AGCATTCGCGGATGAAATAGGCATACCTTTTATGGAAACAAGTGCAAAAGA
genomic: CAAATAGAGCTGTGTCATATGAAACAGCTAAagtatagctt ... ttctttgacaGGCATTCGCAGATGAAATAGGCATACCTTTTATGGAAACAAGTGCAAAAGA
EST: gi|192299109|gb|FG992870.1|FG992870
EST:     AACAAGTGTGATCTGGAAGCGAATAGAGCTGTGTCATATGAAACAGCTAA                         AGCATTCGCAGATGAAATAGGCATACCTTTTATGGAA-CAAGTGCAAAAGA
genomic: AACAAGTGTGATCTGGAAGCAAATAGAGCTGTGTCATATGAAACAGCTAAagtatagctt ... ttctttgacaGGCATTCGCAGATGAAATAGGCATACCTTTTATGGAAACAAGTGCAAAAGA
EST: gi|254317320|gb|GR826265.1|GR826265
EST:     AACAAGTGTGATCTGGAAGCAAATAGAGCTGTGTCATATGAAACAGCTAA                         AGCATTCGCAGATGAAATAGGCATACCTTTTATGGAAACAAGTGCAAAAGA
genomic: AACAAGTGTGATCTGGAAGCAAATAGAGCTGTGTCATATGAAACAGCTAAagtatagctt ... ttctttgacaGGCATTCGCAGATGAAATAGGCATACCTTTTATGGAAACAAGTGCAAAAGA
EST: gi|208042582|gb|GD840980.1|GD840980
EST:     AACAAGTGTGATCTGGAAGCAAATAGAGCTGTGTCATATGAAACAGCTAA                         AGCATTCGCAGATGAAATAGGCATACCTTTTATGGAAACAAGTGCAAAAGA
genomic: AACAAGTGTGATCTGGAAGCAAATAGAGCTGTGTCATATGAAACAGCTAAagtatagctt ... ttctttgacaGGCATTCGCAGATGAAATAGGCATACCTTTTATGGAAACAAGTGCAAAAGA
EST: gi|193693807|gb|FK629035.1|FK629035
EST:     AACAAGTGTGATCTGGAAGCAAATAGAGCTGTGTCATATGAAACAGCTAA                         AGCATTCGCAGATGAAATAGGCATACCTTTTATGGAAACAAGTGCAAAAGA
genomic: AACAAGTGTGATCTGGAAGCAAATAGAGCTGTGTCATATGAAACAGCTAAagtatagctt ... ttctttgacaGGCATTCGCAGATGAAATAGGCATACCTTTTATGGAAACAAGTGCAAAAGA
EST: gi|208309750|gb|GE105068.1|GE105068
EST:     AACAAGTGTGATCTGGAAGCAAATAGAGCTGTGTCATATGAAACAGCTAA                         AGCATTCGCAG
genomic: AACAAGTGTGATCTGGAAGCAAATAGAGCTGTGTCATATGAAACAGCTAAagtatagctt ... ttctttgacaGGCATTCGCAG
EST: gi|193489698|gb|FK455019.1|FK455019
EST:     ACAAAGTGTGATCTGGAAGCAAATAGAGCTGTGTCATATGAAACAGCTAA                         AGCATTCGCAG
genomic: ACAA-GTGTGATCTGGAAGCAAATAGAGCTGTGTCATATGAAACAGCTAAagtatagctt ... ttctttgacaGGCATTCGCAG
EST: gi|208154264|gb|GD955317.1|GD955317
EST:     AACAAGTGTGATCTGGAAGCAAATAGAGCTGTGTCATATGAAACAGCTAA                         AGCATTCGCAGATGAAATAGGCATACCTTTTATGG
genomic: AACAAGTGTGATCTGGAAGCAAATAGAGCTGTGTCATATGAAACAGCTAAagtatagctt ... ttctttgacaGGCATTCGCAGATGAAATAGGCATACCTTTTATGG
EST: gi|193435833|gb|FK399437.1|FK399437
EST:     ACAAGTGTGATCTGGAAGCAAATAGAGCTGTGTCATATGAAACAAGCTAA                         AGCATTCGCAG
genomic: ACAAGTGTGATCTGGAAGCAAATAGAGCTGTGTCATATGAAACA-GCTAAagtatagctt ... ttctttgacaGGCATTCGCAG
EST: gi|193374175|gb|FK342837.1|FK342837
EST:     AACAAGTGTGATCTGGAAGCAAATAGAGCTGTGTCATATGAAACAGCTAA                         AGCATTCGCAGATGAAATAGGCATACCTTTTATGGAAACAAGTGCAAAAGA
genomic: AACAAGTGTGATCTGGAAGCAAATAGAGCTGTGTCATATGAAACAGCTAAagtatagctt ... ttctttgacaGGCATTCGCAGATGAAATAGGCATACCTTTTATGGAAACAAGTGCAAAAGA
EST: gi|193609732|gb|FK560732.1|FK560732
EST:     AACAAGTGTGATCTGGAAGCAAATAGAGCTGTGTCATATGAAACAGCTAA                         AGCATTCGCAG
genomic: AACAAGTGTGATCTGGAAGCAAATAGAGCTGTGTCATATGAAACAGCTAAagtatagctt ... ttctttgacaGGCATTCGCAG
EST: gi|193359510|gb|FK327591.1|FK327591
EST:     AACAAGTGTGATCTGGAAGCAAATAGAGCTGTGTCATATGAAACAGCTAA                         AGCATTCGCAGATGAAATAGGCATACCTTTTATGGAAACAAGTGCAAAAGA
genomic: AACAAGTGTGATCTGGAAGCAAATAGAGCTGTGTCATATGAAACAGCTAAagtatagctt ... ttctttgacaGGCATTCGCAGATGAAATAGGCATACCTTTTATGGAAACAAGTGCAAAAGA
EST: gi|208157709|gb|GD952464.1|GD952464
EST:     AACAAGTGTGATCTGGAAGCAAATAGAGCTGTGTCATATGAAACAGCTAA                         AGCATTCGCAG
genomic: AACAAGTGTGATCTGGAAGCAAATAGAGCTGTGTCATATGAAACAGCTAAagtatagctt ... ttctttgacaGGCATTCGCAG
EST: gi|193413229|gb|FK375994.1|FK375994
EST:     AACAAGTGTGATCTGGAAGCAAATAGAGCTGTGTCATATGAAACAGCTAA                         AGCATTCGCAG
genomic: AACAAGTGTGATCTGGAAGCAAATAGAGCTGTGTCATATGAAACAGCTAAagtatagctt ... ttctttgacaGGCATTCGCAG
EST: gi|193326608|gb|FK288569.1|FK288569
EST:     AACAAGTGTGATCTGGAAGCAAATAGAGCTGTGTCATATGAAACAGCTAA                         AGCATTCGCAGATGAAATAGGCATACCTTTTATGGAAACAAGTGCAAAAGA
genomic: AACAAGTGTGATCTGGAAGCAAATAGAGCTGTGTCATATGAAACAGCTAAagtatagctt ... ttctttgacaGGCATTCGCAGATGAAATAGGCATACCTTTTATGGAAACAAGTGCAAAAGA
EST: gi|193523207|gb|FK479104.1|FK479104
EST:     TCATATGAAACAGCTAA                         AGCATTCGCAGATGGAATAGGCATACCTTTTATGGAAACAAGTGCAAAAGA
genomic: TCATATGAAACAGCTAAagtatagctt ... ttctttgacaGGCATTCGCAGATGAAATAGGCATACCTTTTATGGAAACAAGTGCAAAAGA
EST: gi|193585025|gb|FK539418.1|FK539418
EST:     AACAAGTGTGATCTGGAAGCAAATAGAGCTGTGTCATATGAAACAGCTAA                         AGCATTCGCAGATGAAATAGGCATACCTTTTATGGAAACAAGTGCAAAAGA
genomic: AACAAGTGTGATCTGGAAGCAAATAGAGCTGTGTCATATGAAACAGCTAAagtatagctt ... ttctttgacaGGCATTCGCAGATGAAATAGGCATACCTTTTATGGAAACAAGTGCAAAAGA
EST: gi|208302502|gb|GE097061.1|GE097061
EST:     AACAAGTGTGATCTGGAAGCAAATAGAGCTGTGTCATATGAAACAGCTAA                         AGCATTCGCAG
genomic: AACAAGTGTGATCTGGAAGCAAATAGAGCTGTGTCATATGAAACAGCTAAagtatagctt ... ttctttgacaGGCATTCGCAG
EST: gi|209726159|gb|BW677900.1|BW677900
EST:     AACAAGTGTGATCTGGAAGCAAATAGAGCTGTGTCATATGAAACAGCTAA                         AGCATTCGCAGATGAAATAGGCATACCTTTTATGGAAACAAGTGCAAAAGA
genomic: AACAAGTGTGATCTGGAAGCAAATAGAGCTGTGTCATATGAAACAGCTAAagtatagctt ... ttctttgacaGGCATTCGCAGATGAAATAGGCATACCTTTTATGGAAACAAGTGCAAAAGA
EST: gi|193519792|gb|FK475851.1|FK475851
EST:     AACAAGTGTGATCTGGAAGCAAATAGAGCTGTGTCATATGAAACAGCTAA                         AGCATTCGCAGATGAAATAGGCATACCTTTTATGGAAACAAGTGCAAAAGA
genomic: AACAAGTGTGATCTGGAAGCAAATAGAGCTGTGTCATATGAAACAGCTAAagtatagctt ... ttctttgacaGGCATTCGCAGATGAAATAGGCATACCTTTTATGGAAACAAGTGCAAAAGA
EST: gi|207692872|gb|GD675461.1|GD675461
EST:     AACAAGTGTGATCTGGAAGCAAATAGAGCTGTGTCATATGAAACAGCTAA                         AGCATTCGCAGATGAAATAGGCATACCTTTTATGGAAACAAGTGCAAAAGA
genomic: AACAAGTGTGATCTGGAAGCAAATAGAGCTGTGTCATATGAAACAGCTAAagtatagctt ... ttctttgacaGGCATTCGCAGATGAAATAGGCATACCTTTTATGGAAACAAGTGCAAAAGA
EST: gi|208044330|gb|GD838850.1|GD838850
EST:     AACAAGTGTGATCTGGAAGCAAATAGAGCTGTGTCATATGAAACAGCTAA                         AGCATTCGCAGATGAAATAGGCATACCTTTTATGGAAACAAGTGCAAAAGA
genomic: AACAAGTGTGATCTGGAAGCAAATAGAGCTGTGTCATATGAAACAGCTAAagtatagctt ... ttctttgacaGGCATTCGCAGATGAAATAGGCATACCTTTTATGGAAACAAGTGCAAAAGA
EST: gi|208133070|gb|GD928707.1|GD928707
EST:     AACAAGTGTGATCTGGAAGCAAATAGAGCTGTGTCATATGAAACAGCTAA                         AGCATTCGCAGATGAAATAGGCATACCTTTTATGGAAACAAGTGCAAAAGA
genomic: AACAAGTGTGATCTGGAAGCAAATAGAGCTGTGTCATATGAAACAGCTAAagtatagctt ... ttctttgacaGGCATTCGCAGATGAAATAGGCATACCTTTTATGGAAACAAGTGCAAAAGA
EST: gi|193593524|gb|FK547092.1|FK547092
EST:     AACAAGTGTGATCTGGAAGCAAATAGAGCTGTGTCATATGAAACAGCTAA                         AGCATTCGCAGATGAAATAGGCATACCTTTTATGGAAACAAGTGCAAAAGA
genomic: AACAAGTGTGATCTGGAAGCAAATAGAGCTGTGTCATATGAAACAGCTAAagtatagctt ... ttctttgacaGGCATTCGCAGATGAAATAGGCATACCTTTTATGGAAACAAGTGCAAAAGA
EST: gi|254317319|gb|GR826264.1|GR826264
EST:     AACAAGTGTGATCTGGAAGCAAATAGAGCTGTGTCATATGAAACAGCTAA                         AGCATTCGCAGATGAAATAGGCATACCTTTTATGGAAACAAGTGCAAAAGA
genomic: AACAAGTGTGATCTGGAAGCAAATAGAGCTGTGTCATATGAAACAGCTAAagtatagctt ... ttctttgacaGGCATTCGCAGATGAAATAGGCATACCTTTTATGGAAACAAGTGCAAAAGA
EST: gi|193424300|gb|FK386845.1|FK386845
EST:     AACAAGTGTGATCTGGAAGCAAATAGAGCTGTGTCATATGAAACAGCTAA                         AGCATTCGCAGATGAAATAGGCATACCTTTTATGGAAACAAGTGCAAAAGA
genomic: AACAAGTGTGATCTGGAAGCAAATAGAGCTGTGTCATATGAAACAGCTAAagtatagctt ... ttctttgacaGGCATTCGCAGATGAAATAGGCATACCTTTTATGGAAACAAGTGCAAAAGA
EST: gi|22524492|gb|BU083303.1|BU083303
EST:     AACAAGTGTGATCTGGAAGCAAATAGAGCTGTGTCATATGAAACAGCTAA                         AGCATTCGCAGATGAAATAGGCATACCTTTTATGGAAACAAGTGCAAAAGA
genomic: AACAAGTGTGATCTGGAAGCAAATAGAGCTGTGTCATATGAAACAGCTAAagtatagctt ... ttctttgacaGGCATTCGCAGATGAAATAGGCATACCTTTTATGGAAACAAGTGCAAAAGA
EST: gi|207738253|gb|GD713707.1|GD713707
EST:     GTGATCTGGAAGCAAATAGAGCTGTGTCATATGAAACAGCTAA                         AGCATTCGCAGATGAAATAGGCATACCTTTTATGGAAACAAGTGCAAAAGA
genomic: GTGATCTGGAAGCAAATAGAGCTGTGTCATATGAAACAGCTAAagtatagctt ... ttctttgacaGGCATTCGCAGATGAAATAGGCATACCTTTTATGGAAACAAGTGCAAAAGA
EST: gi|193591100|gb|FK545575.1|FK545575
EST:     AACAAGTGTGATCTGGAAGCAAATAGAGCTGTGTCATATGAAACAGCTAA                         AGCATTCGCAGATGAAATAGGCATACCTTTTATGGAAACAAGTGCAAAAGA
genomic: AACAAGTGTGATCTGGAAGCAAATAGAGCTGTGTCATATGAAACAGCTAAagtatagctt ... ttctttgacaGGCATTCGCAGATGAAATAGGCATACCTTTTATGGAAACAAGTGCAAAAGA
EST: gi|193457696|gb|FK424988.1|FK424988
EST:     CTGTGTCATATGAAACAGCTAA                         AGCATTCGCAGATGAAATAGGCATACCTTTTATGGAAACAAGTGCAAAAGA
genomic: CTGTGTCATATGAAACAGCTAAagtatagctt ... ttctttgacaGGCATTCGCAGATGAAATAGGCATACCTTTTATGGAAACAAGTGCAAAAGA
EST: gi|193649017|gb|FK599738.1|FK599738
EST:     AACAAGTGTGATCTGGAAGCAAATAGAGCTGTGTCATATGAAACAGCTAA                         AGCATTCGCAGATGAAATAGGCATACCTTTTATGGAAACAAGTGCAAAAGA
genomic: AACAAGTGTGATCTGGAAGCAAATAGAGCTGTGTCATATGAAACAGCTAAagtatagctt ... ttctttgacaGGCATTCGCAGATGAAATAGGCATACCTTTTATGGAAACAAGTGCAAAAGA
EST: gi|193311120|gb|FK275072.1|FK275072
EST:     AACAAGTGTGATCTGGAAGCAAATAGAGCTGTGTCATATGAAACAGCTAA                         AGCATTCGCAGATGAAATAGGCATACCTTTTATGGAAACAAGTGCAAAAGA
genomic: AACAAGTGTGATCTGGAAGCAAATAGAGCTGTGTCATATGAAACAGCTAAagtatagctt ... ttctttgacaGGCATTCGCAGATGAAATAGGCATACCTTTTATGGAAACAAGTGCAAAAGA
EST: gi|208065297|gb|GD861715.1|GD861715
EST:     AACAAGTGTGATCTGGAAGCAAATAGAGCTGTGTCATATGAAACAGCTAA                         AGCATTCGCAGATGAAATAGGCATACCTTTTATGGAAACAAGTGCAAAAGA
genomic: AACAAGTGTGATCTGGAAGCAAATAGAGCTGTGTCATATGAAACAGCTAAagtatagctt ... ttctttgacaGGCATTCGCAGATGAAATAGGCATACCTTTTATGGAAACAAGTGCAAAAGA
EST: gi|193342554|gb|FK306814.1|FK306814
EST:     AACAAGTGTGATCTGGAAGCAAATAGAGCTGTGTCATATGAAACAGCTAA                         AGCATTCGCAG
genomic: AACAAGTGTGATCTGGAAGCAAATAGAGCTGTGTCATATGAAACAGCTAAagtatagctt ... ttctttgacaGGCATTCGCAG
EST: gi|207808064|gb|GD780093.1|GD780093
EST:     AACAAGTGTGATCTGGAAGCAAATAGAGCTGTGTCATATGAAACAGCTAA                         AGCATTCGCAGATGAAATAGGCATACCTTTTATGG
genomic: AACAAGTGTGATCTGGAAGCAAATAGAGCTGTGTCATATGAAACAGCTAAagtatagctt ... ttctttgacaGGCATTCGCAGATGAAATAGGCATACCTTTTATGG
EST: gi|193629982|gb|FK573288.1|FK573288
EST:     AACAAGTGTGATCTGGAAGCAAATAGAGCTGTGTCATATGAAACAGCTAA                         AGCATTCGCAG
genomic: AACAAGTGTGATCTGGAAGCAAATAGAGCTGTGTCATATGAAACAGCTAAagtatagctt ... ttctttgacaGGCATTCGCAG
EST: gi|193656824|gb|FK601042.1|FK601042
EST:     AACAAGTGTGATCTGGAAGCAAATAGAGCTGTGTCATATGAAACAGCTAA                         AGCATTCGCAGATGAAATAGGCATACCTTTTATGGAAACAAGTGCAAAAGA
genomic: AACAAGTGTGATCTGGAAGCAAATAGAGCTGTGTCATATGAAACAGCTAAagtatagctt ... ttctttgacaGGCATTCGCAGATGAAATAGGCATACCTTTTATGGAAACAAGTGCAAAAGA
EST: gi|208175880|gb|GD974713.1|GD974713
EST:     AACAAGTGTGATCTGGAAGCAAATAGAGCTGTGTCATATGAAACAGCTAA                         AGCATTCGCAGATGAAATAGGCATACCTTTTATGGAAACAAGTGCAAAAGA
genomic: AACAAGTGTGATCTGGAAGCAAATAGAGCTGTGTCATATGAAACAGCTAAagtatagctt ... ttctttgacaGGCATTCGCAGATGAAATAGGCATACCTTTTATGGAAACAAGTGCAAAAGA
EST: gi|193348251|gb|FK311895.1|FK311895
EST:     AACAAGTGTGATCTGGAAGCAAATAGAGCTGTGTCATATGAAACAGCTAA                         AGCATTCGCAG
genomic: AACAAGTGTGATCTGGAAGCAAATAGAGCTGTGTCATATGAAACAGCTAAagtatagctt ... ttctttgacaGGCATTCGCAG
EST: gi|207796751|gb|GD768477.1|GD768477
EST:     AACAAGTGTGATCTGGAAGCAAATAGAGCTGTGTCATATGAAACAGCTAA                         AGCATTCGCAGATGAAATAGGCATACCTTTTATGGAAACAAGTGCAAAAGA
genomic: AACAAGTGTGATCTGGAAGCAAATAGAGCTGTGTCATATGAAACAGCTAAagtatagctt ... ttctttgacaGGCATTCGCAGATGAAATAGGCATACCTTTTATGGAAACAAGTGCAAAAGA
EST: gi|151407899|gb|EV277714.1|EV277714
EST:     AACAAGTGTGATCTGGAAGCAAATAGAGCTGTGTCATATGAAACAGCTAA                         AGCATTCGCAGATGAAATAGGCATACCTTTTATGGAAACAAGTGCAAAAGA
genomic: AACAAGTGTGATCTGGAAGCAAATAGAGCTGTGTCATATGAAACAGCTAAagtatagctt ... ttctttgacaGGCATTCGCAGATGAAATAGGCATACCTTTTATGGAAACAAGTGCAAAAGA
EST: gi|208340539|gb|GE136219.1|GE136219
EST:     AACAAGTGTGATCTGGAAGCAAATAGAGCTGTGTCATATGAAACAGCTAA                         AGCATTCGCAGATGAAATAGGCATACCTTTTATGGAAACAAGTGCAAAAGA
genomic: AACAAGTGTGATCTGGAAGCAAATAGAGCTGTGTCATATGAAACAGCTAAagtatagctt ... ttctttgacaGGCATTCGCAGATGAAATAGGCATACCTTTTATGGAAACAAGTGCAAAAGA
EST: gi|209719144|gb|BW662761.1|BW662761
EST:     AACAAGTGTGATCTGGAAGCAAATAGAGCTGTGTCATATGAAACAGCTAA                         AGCATTCGCAGATGAAATAGGCATACCTTTTATGGAAACAAGTGCAAAAGA
genomic: AACAAGTGTGATCTGGAAGCAAATAGAGCTGTGTCATATGAAACAGCTAAagtatagctt ... ttctttgacaGGCATTCGCAGATGAAATAGGCATACCTTTTATGGAAACAAGTGCAAAAGA
EST: gi|193698612|gb|FK634951.1|FK634951
EST:     AACAAGTGTGATCTGGAAGCAAATAGAGCTGTGTCATATGAAACAGCTAA                         AGCATTCGCAGATGAAATAGGCATACCTTTTATGGAAACAAGTGCAAAAGG
genomic: AACAAGTGTGATCTGGAAGCAAATAGAGCTGTGTCATATGAAACAGCTAAagtatagctt ... ttctttgacaGGCATTCGCAGATGAAATAGGCATACCTTTTATGGAAACAAGTGCAAAAGA
EST: gi|193551238|gb|FK507995.1|FK507995
EST:     AACAAGTGTGATCTGGAAGCAAATAGAGCTGTGTCATATGAAACAGCTAA                         AGCATTCGCAG
genomic: AACAAGTGTGATCTGGAAGCAAATAGAGCTGTGTCATATGAAACAGCTAAagtatagctt ... ttctttgacaGGCATTCGCAG
EST: gi|208176249|gb|GD977322.1|GD977322
EST:     AACAAGTGTGATCTGGAAGCAAATAGAGCTGTGTCATATGAAACAGCTAA                         AGCATTCGCAGATGAAATAGGCATACCTTTTATGGAAACAAGTGCAAAAGA
genomic: AACAAGTGTGATCTGGAAGCAAATAGAGCTGTGTCATATGAAACAGCTAAagtatagctt ... ttctttgacaGGCATTCGCAGATGAAATAGGCATACCTTTTATGGAAACAAGTGCAAAAGA
EST: gi|192322414|gb|FK014895.1|FK014895
EST:     AACAAGTGTGATCTGGAAGCAAATAGAGCTGTGTCATATGAAACAGCTAA                         AGCATTCGCAGATGAAATAGGCATACCTTTTATGGAAACAAGTGCAAACGA
genomic: AACAAGTGTGATCTGGAAGCAAATAGAGCTGTGTCATATGAAACAGCTAAagtatagctt ... ttctttgacaGGCATTCGCAGATGAAATAGGCATACCTTTTATGGAAACAAGTGCAAAAGA
EST: gi|193615746|gb|FK561959.1|FK561959
EST:     TATGAAACAGCTAA                         AGCATTCGCAGATGAAATAGGCATACCTTTTATGGAAACAAGTGCAAAAGA
genomic: TATGAAACAGCTAAagtatagctt ... ttctttgacaGGCATTCGCAGATGAAATAGGCATACCTTTTATGGAAACAAGTGCAAAAGA
EST: gi|19346832|gb|BM891712.1|BM891712
EST:     AACAAGTGTGATCTGGAAGCAAATAGAGCTGTGTCATATGAAACAGCTAA                         AAGCATTCGCAGATGAAATAGGCATACCTTTTATGGAAACAAGTGCAAAAG
genomic: AACAAGTGTGATCTGGAAGCAAATAGAGCTGTGTCATATGAAACAGCTAAagtatagctt ... ttctttgacaG-GCATTCGCAGATGAAATAGGCATACCTTTTATGGAAACAAGTGCAAAAG
EST: gi|208162377|gb|GD963122.1|GD963122
EST:     AACAAGTGTGATCTGGAAGCAAATAGAGCTGTGTCATATGAAACAGCTAA                         AGCATTCGCAGATGAAATAGGCATACCTTTTATGGAAACAAGTGCAAAAGA
genomic: AACAAGTGTGATCTGGAAGCAAATAGAGCTGTGTCATATGAAACAGCTAAagtatagctt ... ttctttgacaGGCATTCGCAGATGAAATAGGCATACCTTTTATGGAAACAAGTGCAAAAGA
EST: gi|207707704|gb|GD689120.1|GD689120
EST:     AACAAGTGTGATCTGGAAGCAAATAGAGCTGTGTCATATGAAACAGCTAA                         AGCATTCGCAGATGAAATAGGCATACCTTTTATGGAAACAAGTGCAAAAGA
genomic: AACAAGTGTGATCTGGAAGCAAATAGAGCTGTGTCATATGAAACAGCTAAagtatagctt ... ttctttgacaGGCATTCGCAGATGAAATAGGCATACCTTTTATGGAAACAAGTGCAAAAGA
EST: gi|14259352|gb|BG882260.1|BG882260
EST:     AACAAGTGTGATCTGGAAGCAAATAGAGCTGTGTCATATGAAACAGCTAA                         AGCATTCCCAGAT
genomic: AACAAGTGTGATCTGGAAGCAAATAGAGCTGTGTCATATGAAACAGCTAAagtatagctt ... ttctttgacaGGCATTCGCAGAT
EST: gi|209719631|gb|BW672086.1|BW672086
EST:     AACAAGTGTGATCTGGAAGCAAATAGAGCTGTGTCATATGAAACAGCTAA                         AGCATTCGCAGATGNAATAGGCATACCTTTTATGGAAACAAGT
genomic: AACAAGTGTGATCTGGAAGCAAATAGAGCTGTGTCATATGAAACAGCTAAagtatagctt ... ttctttgacaGGCATTCGCAGATGAAATAGGCATACCTTTTATGGAAACAAGT
EST: gi|193708863|gb|FK645031.1|FK645031
EST:     AACAAGTGTGATCTGGAAGCAAATAGAGCTGTGTCATATGAAACAGCTAA                         AGCATTCGCAGATGAAATAGGCATACCTTTTATGGAAACAAGTGCAAAAAG
genomic: AACAAGTGTGATCTGGAAGCAAATAGAGCTGTGTCATATGAAACAGCTAAagtatagctt ... ttctttgacaGGCATTCGCAGATGAAATAGGCATACCTTTTATGGAAACAAGTGCAAAA-G
EST: gi|193358780|gb|FK328458.1|FK328458
EST:     AACAAGTGTGATCTGGAAGCAAATAGAGCTGTGTCATATGAAACAGCTAA                         AGACATTCGCAG
genomic: AACAAGTGTGATCTGGAAGCAAATAGAGCTGTGTCATATGAAACAGCTAAagtatagctt ... ttctttgacaGG-CATTCGCAG
EST: gi|207843807|gb|GD814300.1|GD814300
EST:     AACAAGTGTGATCTGGAAGCAAATAGAGCTGTGTCATATGAAACAGCTAA                         AGCATTCGCAGATGAAATAGGCATACCTTTTATGGAAACAAGTGCA
genomic: AACAAGTGTGATCTGGAAGCAAATAGAGCTGTGTCATATGAAACAGCTAAagtatagctt ... ttctttgacaGGCATTCGCAGATGAAATAGGCATACCTTTTATGGAAACAAGTGCA
EST: gi|213602253|gb|DB958513.1|DB958513
EST:     AACAAGTGTGATCTGGAAGCAAATAGAGCTGTGTCATATGAAACAGCTAA                         AGCATTCGCAGATGAAATAGGCATACCTTTTATGGAAACAAGTGCAAAAGA
genomic: AACAAGTGTGATCTGGAAGCAAATAGAGCTGTGTCATATGAAACAGCTAAagtatagctt ... ttctttgacaGGCATTCGCAGATGAAATAGGCATACCTTTTATGGAAACAAGTGCAAAAGA

Putative cis-regulatory sequences

 atgc intron ATGC exonic elements by Pertea et al.
 ATGC exon atgc putative intronic elements
 ATGC putative exonic elements identified for retained introns
        10        20        30        40        50        60        70        80        90        100       110       120       130       140       150       160       170       180       190       200       210       220 
---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| 
GTGAAATTGATCGCTATGCAAGTGATAATGTTAACAAGCTTTTGGTTGGAAACAAGTGTGATCTGGAAGCAAATAGAGCTGTGTCATATGAAACAGCTAAagtatagctttgttgcacatcccttgaatttttcattttttcatataaagtttcaaacttttgttcatgattagatctgttgggttattaggattttattcctattccagcttcccttacccccatctttaatatttgttttttctttgaca

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -  TGGAAG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AAGCAA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AGAGCT