1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' |
AGTGCTGTGACTTGGTTATGCTTTATGCCAAACTCTGAGCAAATAATCACTGCATCCAAGGATGGTTCAATGAGACTATGGAATATCAATGgtaagcaagttttgaaagatgattattttttacttatcgaattggttttatttttctagcaaacacttgatgtcgaagtcggcctggagttgcaaatagt...
species | Glycine max |
transcript | GLYMA18G45270.1 |
intron # | 7 |
splice site | 5' |
intron type | U2 |
EST: AATAATCACTGCATCCAAGGATGGTTCAATGAGACTATGGAATATCAATG TTCGTTATCATCTTGATGAGGATCCGAAGACGCTGAAGGTGTTCCTAATTCEST: gi|209718265|gb|BW677489.1|BW677489
genomic: AATAATCACTGCATCCAAGGATGGTTCAATGAGACTATGGAATATCAATGgtaagcaagt ... tatcctgaagTTCGTTATCATCTTGATGAGGATCCGAAGACGCTGAAGGTGTTCCTAATTC
EST: AATGAGACTATGGAATATCAATG TTCGTTATCATCTTGATGAGGATCCGAAGACGCTGAAGGTGTTCCTAATTCEST: gi|151410692|gb|EV280507.1|EV280507
genomic: AATGAGACTATGGAATATCAATGgtaagcaagt ... tatcctgaagTTCGTTATCATCTTGATGAGGATCCGAAGACGCTGAAGGTGTTCCTAATTC
EST: AATAATCACTGCATCCAAGGATGGTTCAATGAGACTATGGAATATCAATG TTCGTTATCATCTTGATGAGGATCCGAAGACGCTGAAGGTGTTCCTAATTCEST: gi|192295611|gb|FG990465.1|FG990465
genomic: AATAATCACTGCATCCAAGGATGGTTCAATGAGACTATGGAATATCAATGgtaagcaagt ... tatcctgaagTTCGTTATCATCTTGATGAGGATCCGAAGACGCTGAAGGTGTTCCTAATTC
EST: AATAATCACTGCATCCAAGGATGGTTCAATGAGACTATGGAATATCAATG TTCGTTATCATCTTGATGAGGATCCGAAGACGCTGAAGGTGTTCCTAATTCEST: gi|192319404|gb|FK005844.1|FK005844
genomic: AATAATCACTGCATCCAAGGATGGTTCAATGAGACTATGGAATATCAATGgtaagcaagt ... tatcctgaagTTCGTTATCATCTTGATGAGGATCCGAAGACGCTGAAGGTGTTCCTAATTC
EST: AATAATCACTGCATCCAAGGATGGTTCAATGAGACTATGGAATATCAATG TTCGTTATCATCTTGATGAGGATCCGAAGACGCTGAAGGTGTTCCTAATTC
genomic: AATAATCACTGCATCCAAGGATGGTTCAATGAGACTATGGAATATCAATGgtaagcaagt ... tatcctgaagTTCGTTATCATCTTGATGAGGATCCGAAGACGCTGAAGGTGTTCCTAATTC
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| AGTGCTGTGACTTGGTTATGCTTTATGCCAAACTCTGAGCAAATAATCACTGCATCCAAGGATGGTTCAATGAGACTATGGAATATCAATGgtaagcaagttttgaaagatgattattttttacttatcgaattggttttatttttctagcaaacacttgatgtcgaagtcggcctggagttgcaaatagt
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