1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' |
GCTGCTGCTAAGATTATGATGAAGAAAAAGAAGgtgacataccacttaattgttcttttatgatttttttgttttgagaaatccttggtaaaaagttcaatcgacaactcaagtgattaattaattcaatgac...
species | Glycine max |
transcript | GLYMA18G01280.1 |
intron # | 7 |
splice site | 5' |
intron type | U2 |
EST: GCTGCTGCTAAGATTATGATGAAGAAAAAGAAG GGAAGGATCGTCAATATTGCATCAGTTGTTGGTTTGGTTGGCAATGTTGGAEST: gi|192333775|gb|FK025498.1|FK025498
genomic: GCTGCTGCTAAGATTATGATGAAGAAAAAGAAGgtgacatacc ... ggttttgcagGGAAGGATCGTCAATATTGCATCAGTTGTTGGTTTGGTTGGCAATGTTGGA
EST: GCTGCTGCTAAGATTATGATGAAGAAAAAGAAG GGAAGGATCGTCAATATTGCATCAGTTGTTGGTTTGGTTGGCAATGTTGGAEST: gi|192334677|gb|FK025224.1|FK025224
genomic: GCTGCTGCTAAGATTATGATGAAGAAAAAGAAGgtgacatacc ... ggttttgcagGGAAGGATCGTCAATATTGCATCAGTTGTTGGTTTGGTTGGCAATGTTGGA
EST: AAGATTATGATGAAGAAAAAGAAG GGAAGGATCGTCAATATTGCATCAGTTGTTGGTTTGGTTGGCAATGTTGGA
genomic: AAGATTATGATGAAGAAAAAGAAGgtgacatacc ... ggttttgcagGGAAGGATCGTCAATATTGCATCAGTTGTTGGTTTGGTTGGCAATGTTGGA
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| GCTGCTGCTAAGATTATGATGAAGAAAAAGAAGgtgacataccacttaattgttcttttatgatttttttgttttgagaaatccttggtaaaaagttcaatcgacaactcaagtgattaattaattcaatgac
- TGCTGC
- GCTGCT
- - - - - - - - - TGAAGA
- - - - - - - - - - AAGAAA
- - - - - - - - - - - - - AAAGAA
- - - - - - - - - - - - - AAGAAG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -ggtaaaaa