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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

ATTCAAATGTCGTCATGAATTTCCTCTGTGGATCCAGTGAGGCAAATGAGAGTACCCAGTTTGACTGGCTTAAATACTTTGATGTCGTCATCACTGGCAGgtcttgttcttctcttggcatctgcaactagttaactagtttttgttcatcattccgcttaaagtaaattttcccataattagggggccattggaattcc...

Basic information

species Glycine max
transcript GLYMA17G36900.1
intron # 7
splice site 5'
intron type U2

Orthologous splice sites


 atgc   intronic sequence     ATGC   exonic sequence


upper sequence: GLYMA17G36900.1 (Glycine max), 5'ss of exon 7
lower sequence: Vv18s0001g12510.t01 (Vitis vinifera), 5'ss of exon 7
ATTCAAATGTCGTCATGAATTTCCTCTGTGGATCCAGTGAGGCAAATGAGAGTACCC------AGTTTGACTGGCTTAAATACTTTGATGTCGTCATCACTGGCAGgtcttgttcttctcttggcatctgcaac---tagttaactagtttttgttcatcattccgcttaaagtaaattttccc-ataattagggggccattggaattcc
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------ATATCGTGATGAATTTCCTTTGTGGCCCCCGGATGTTGGATGGTAGCGCCTCTTCCAATTTTGACTGGCTTCAGTACTTTGATGTTGTCATTACTGGCAGgtgatgttctttcgttaaagatcataacatttaacagaatatgtatggtttcttttatttttttcaataaccaaacttgacaacaaggttagcatcatat----