Skip to another splice site:
1  
 5'  3'   
2  
 5'  3'   
3  
 5'  3'   
4  
 5'  3'   
5  
 5'  3'   
6  
 5'  3'   
7  
 5'  3'   
8  
 5'  3'   
9  
 5'  3'   
10  
 5'  3'   

Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

GTGGAATTCCGTTCTTCATATTCACCTGCTTGCATTCGCTCAAGTCAGCAGTTTCCTGAGCTCTCAATTACgtatgcttctctttgactctttgtcttgaactattcctcctcccttaagtaaaatgggaaaattactgaagaattcaggttgttgtactaacttgatatg...

Basic information

species Glycine max
transcript GLYMA17G26900.1
intron # 7
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|151401073|gb|EV270887.1|EV270887
EST:     TCACCTGCTTGCATTCGCTCAAGTCAGCAGTTTCCTGAGCTCTCAATTAC                         ATATTCAAGCAAAAATTTATCATTTGGAATAGTTGATCTTGGTCTCTTTCC
genomic: TCACCTGCTTGCATTCGCTCAAGTCAGCAGTTTCCTGAGCTCTCAATTACgtatgcttct ... tctcctgcagATATTCAAGCAAAAATTTATCATTTGGAATAGTTGATCTTGGTCTCTTTCC
EST: gi|151412705|gb|EV282517.1|EV282517
EST:     TCACCTGCTTGCATTCGCTCAAGTCAGCAGTTTCCTGAGCTCTCAATTAC                         ATATTCAAGCAAAAATTTATCATTTGGAATAGTTGATCTTGGTCTCTTTCC
genomic: TCACCTGCTTGCATTCGCTCAAGTCAGCAGTTTCCTGAGCTCTCAATTACgtatgcttct ... tctcctgcagATATTCAAGCAAAAATTTATCATTTGGAATAGTTGATCTTGGTCTCTTTCC
EST: gi|151396592|gb|EV266469.1|EV266469
EST:     TCACCTGCTTGCATTCGCTCAAGTCAGCAGTTTCCTGAGCTCTCAATTAC                         ATATTCAAGCAAAAATTTATCATTTGGAATAGTTGATCTTGGTCTCTTTCC
genomic: TCACCTGCTTGCATTCGCTCAAGTCAGCAGTTTCCTGAGCTCTCAATTACgtatgcttct ... tctcctgcagATATTCAAGCAAAAATTTATCATTTGGAATAGTTGATCTTGGTCTCTTTCC
EST: gi|254342909|gb|GR859071.1|GR859071
EST:     TCACCTGCTTGCATTCGCTCAAGTCAGCAGTTTCCTGAGCTCTCAATTAC                         ATATTCAAGCAAAAATTTATCATTTGGAATAGTTGATCTTGGTCTCTTTCC
genomic: TCACCTGCTTGCATTCGCTCAAGTCAGCAGTTTCCTGAGCTCTCAATTACgtatgcttct ... tctcctgcagATATTCAAGCAAAAATTTATCATTTGGAATAGTTGATCTTGGTCTCTTTCC
EST: gi|6719570|gb|AW307217.1|AW307217
EST:     AGTTTCCTGAGCTCTCAATTAC                         ATATTCAAGCAAAAATTTATCATTTGGAATAGTTGATCTTGGTCTCTTTCC
genomic: AGTTTCCTGAGCTCTCAATTACgtatgcttct ... tctcctgcagATATTCAAGCAAAAATTTATCATTTGGAATAGTTGATCTTGGTCTCTTTCC
EST: gi|15203897|gb|BI426665.1|BI426665
EST:     TCACCTGCTTGCATTCGCTCAAGTCAGCAGTTTCCTGAGCTCTCAATTAC                         ATATTCAAGCAAAAATTTATCATTTGGAATAGTTGATCTTGGTCTCTTTCC
genomic: TCACCTGCTTGCATTCGCTCAAGTCAGCAGTTTCCTGAGCTCTCAATTACgtatgcttct ... tctcctgcagATATTCAAGCAAAAATTTATCATTTGGAATAGTTGATCTTGGTCTCTTTCC
EST: gi|151402880|gb|EV272693.1|EV272693
EST:     TCACCTGCTTGCATTCGCTCAAGTCAGCAGTTTCCTGAGCTCTCAATTAC                         ATATTCAAGCAAAAATTTATCATTTGGAATAGTTGATCTTGGTCTCTTTCC
genomic: TCACCTGCTTGCATTCGCTCAAGTCAGCAGTTTCCTGAGCTCTCAATTACgtatgcttct ... tctcctgcagATATTCAAGCAAAAATTTATCATTTGGAATAGTTGATCTTGGTCTCTTTCC
EST: gi|254342910|gb|GR859072.1|GR859072
EST:     TCACCTGCTTGCATTCGCTCAAGTCAGCAGTTTCCTGAGCTCTCAATTAC                         ATATTCAAGCAAAAATTTATCATTTGGAATAGTTGATCTTGGTCTCTTTCC
genomic: TCACCTGCTTGCATTCGCTCAAGTCAGCAGTTTCCTGAGCTCTCAATTACgtatgcttct ... tctcctgcagATATTCAAGCAAAAATTTATCATTTGGAATAGTTGATCTTGGTCTCTTTCC