1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' |
GTGCTGGTGGCTGATATCAACATTGGATATGAAGATTTTGTGAACACCCAGgttagtaatggatatgttccatctttttgccttttcttgctgacagctatatcagcttaaccgttcagttgtttactggtttttattctgtatatctgtgaag
species | Glycine max |
transcript | GLYMA17G09970.1 |
intron # | 7 |
splice site | 5' |
intron type | U2 |
EST: TGCTGGTGGCTGATATCAACATTGGATATGAAGATTTTGTGAACACCCAG GTCCTTGCTTTCAATGGTCAACCAGTGAAAAACCTGAAGAGCTTAGCCACTEST: gi|17964168|gb|BM270907.1|BM270907
genomic: TGCTGGTGGCTGATATCAACATTGGATATGAAGATTTTGTGAACACCCAGgttagtaatg ... atctgtgaagGTCCTTGCTTTCAATGGTCAACCAGTGAAAAACCTGAAGAGCTTAGCCACT
EST: TGCTGGTGGCTGATATCAACATTGGATATGAAGATTTTGTGAACACCCAG GTCCTTGCTTTCAATGGTCAACCAGTGAAAAACCTGAAGAGCTTAGCCACTEST: gi|6481804|gb|AW201075.1|AW201075
genomic: TGCTGGTGGCTGATATCAACATTGGATATGAAGATTTTGTGAACACCCAGgttagtaatg ... atctgtgaagGTCCTTGCTTTCAATGGTCAACCAGTGAAAAACCTGAAGAGCTTAGCCACT
EST: TGCTGGTGGCTGATATCAACATTGGATATGAAGATTTTGTGAACACCCAG GTCCTTGCTTTCAATGGTCAACCAGTGAAAAACCTGAAGAGCTTAGCCACT
genomic: TGCTGGTGGCTGATATCAACATTGGATATGAAGATTTTGTGAACACCCAGgttagtaatg ... atctgtgaagGTCCTTGCTTTCAATGGTCAACCAGTGAAAAACCTGAAGAGCTTAGCCACT
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| GTGCTGGTGGCTGATATCAACATTGGATATGAAGATTTTGTGAACACCCAGgttagtaatggatatgttccatctttttgccttttcttgctgacagctatatcagcttaaccgttcagttgtttactggtttttattctgtatatctgtgaag
- - TGGTGG
- - - - GCTGAT
- - - - - - - - - - - - - - TGAAGA