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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

TCACCTTCTTTTTTATGATCCCAATTGCAATTGTACAAGGTCTTGCAAGTATTGACGGAATCCAGAAAAGAGCGCCATGGTTGAATCCTCTTATTGAAATgtaagtttcatctcatagttgtacctctgaatatataattccatccccatgcatccctggagattacttatttgaatttactttattgtgcag

Basic information

species Glycine max
transcript GLYMA17G01400.1
intron # 7
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|193528611|gb|FK486843.1|FK486843
EST:     ATTGACGGAATCCAGAAAAGAGCGCCATGGTTGAATCCTCTTATTGAAAT                         TCCTTTCATTAAGTCATTCATTCAAGGTTTTCTACCGGGTATTGCATTGAA
genomic: ATTGACGGAATCCAGAAAAGAGCGCCATGGTTGAATCCTCTTATTGAAATgtaagtttca ... tattgtgcagTCCTTTCATTAAGTCATTCATTCAAGGTTTTCTACCGGGTATTGCATTGAA
EST: gi|193694174|gb|FK630298.1|FK630298
EST:     ATTGACGGAATCCAGAAAAGAGCGCCATGGTTGAATCCTCTTATTGAAAT                         TCCTTTCATTAAGTCATTCATTCAAGGTTTTCTACCGGGTATTGCATTGAA
genomic: ATTGACGGAATCCAGAAAAGAGCGCCATGGTTGAATCCTCTTATTGAAATgtaagtttca ... tattgtgcagTCCTTTCATTAAGTCATTCATTCAAGGTTTTCTACCGGGTATTGCATTGAA
EST: gi|193517271|gb|FK477278.1|FK477278
EST:     ATTGACGGAATCCAGAAAAGAGCGCCATGGTTGAATCCTCTTATTGAAAT                         TCCTTTCATTAAGTCATTCATTCAAGGTTTTCTACCGGGTATTGCATTGAA
genomic: ATTGACGGAATCCAGAAAAGAGCGCCATGGTTGAATCCTCTTATTGAAATgtaagtttca ... tattgtgcagTCCTTTCATTAAGTCATTCATTCAAGGTTTTCTACCGGGTATTGCATTGAA