Skip to another splice site:
1  
 5'  3'   		2  
 5'  3'   		3  
 5'  3'   		4  
 5'  3'   		5  
 5'  3'   		6  
 5'  3'   		7  
 5'  3'   

Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

TGTTTTTAGTTTTGGAGTGATGGTTCTAGAGATTATTTCAGGAAAAAAGAATTCAGGCTTATATGAACCACATCGTGTTGCTGAGGGCCTCCTGAGTTGTgtgagtatgatcatcttctaactatttggtttctgtgcattattgctcatatgtttcattttcaatggtaaatcaaattgatttaattgcaaagacgtgtacaaacttgaatttttaatttgacaaattgttacag

Basic information

species Glycine max
transcript GLYMA16G32730.1
intron # 7
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|12688396|gb|BG154732.1|BG154732
EST:     GCTTATATGAACCACATCGTGTTGCTGAGGGCCTGCTGAGTTGT                         GTGAGGAGACAATGGAGGGATCAAAAACCGTTAAGCATACTAGACGCAAGT
genomic: GCTTATATGAACCACATCGTGTTGCTGAGGGCCTCCTGAGTTGTgtgagtatga ... attgttacagGTTTGGAGACAATGGAGGGATCAAAAACCGTTAAGCATACTAGACGCAAGT
EST: gi|31310232|gb|CD395435.1|CD395435
EST:     ATTCAGGCTTATATGAACCACATCGTGCTGCTGAGGGCCTCCTGAGTTGT                         GTTTGGAGACAATGGAGGGATCAAAAACCGTTAAGCATACTAGACGCAAGT
genomic: ATTCAGGCTTATATGAACCACATCGTGTTGCTGAGGGCCTCCTGAGTTGTgtgagtatga ... attgttacagGTTTGGAGACAATGGAGGGATCAAAAACCGTTAAGCATACTAGACGCAAGT