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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

AATGATGGGTCATGAGTGGAAGGATATTGCTTTTGTTCAGAAGTCAAACGTGTAGAGTTATATACAATAAATTACAGATTTCCTTGGTCCCCATGAAAGgtatgtttcattcctgctaatattttttctttttagcttgttttcttttccttcattggaattttttgttactttattttactttttgtagtaagatctttttcttacaactgaagtcatgggatgagttctaaagttatgaagcttcgattatgatag

Basic information

species Glycine max
transcript GLYMA16G27960.1
intron # 7
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|22525267|gb|BU084078.1|BU084078
EST:     GTGTAGAGTTATATACAATAAATTACAGATTTCCTTGGTCCCCATGAAAG                         GAAAGAAGTTCCACGAAATG
genomic: GTGTAGAGTTATATACAATAAATTACAGATTTCCTTGGTCCCCATGAAAGgtatgtttca ... attatgatagGAAAGAAGTTCCACGAAATG
EST: gi|51338397|gb|CO982263.1|CO982263
EST:     GTGTAGAGTTATATACAATAAATTACAGATTTCCTTGGTCCCCATGAAAG                         GAAAGAAGTTCCACGAAATGGTTCATTTGTCCACTCCAAACCGACTGTGGA
genomic: GTGTAGAGTTATATACAATAAATTACAGATTTCCTTGGTCCCCATGAAAGgtatgtttca ... attatgatagGAAAGAAGTTCCACGAAATGGTTCATTTGTCCACTCCAAACCGACTGTGGA