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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

ACGAACTTAAAAGAAATGCTGATGTTTATGAGATACTTCGTAGAACCCATTTTCATTCACTTTCTTATGTTGGACTTCCCAAAAATATCCTTGATCATGAgtgagtgcaatctttagtatactatgacaaactatttttttttttttacttcgttattagaactgttgtacttttttccacattgtatgttttacttttg...

Basic information

species Glycine max
transcript GLYMA16G27760.1
intron # 7
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|14125650|gb|BG790088.1|BG790088
EST:     TTTCATTCACTTTCTTATGTTGGACTTCCCAAAAATATCCTTGATCATGA                         ACGAATAATTTGGTTTGGTGATCTGAATTATCGTATCAACTTATCAAATGT
genomic: TTTCATTCACTTTCTTATGTTGGACTTCCCAAAAATATCCTTGATCATGAgtgagtgcaa ... ttatatgcagACGAATAATTTGGTTTGGTGATCTGAATTATCGTATCAACTTATCAAATGT
EST: gi|207736385|gb|GD712600.1|GD712600
EST:     TTTCATTCACTTTCTTATGTTGGACTTCCCAAAAATATCCTTGATCATGA                         ACGAATAATTTGGT
genomic: TTTCATTCACTTTCTTATGTTGGACTTCCCAAAAATATCCTTGATCATGAgtgagtgcaa ... ttatatgcagACGAATAATTTGGT