1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' |
TGATGTTATTGTGGAAAATTGGGGTGATTCTCCGCTATCTATGCTTCCAATATATCAAGAACTTATTGAAGGTGGTATCAGAATATGGGTATTCAGgtatattctgaaaacccggtgatttcagttattaataagtaactttaatgctgagaatgaattttgcttgtccaaatgtgtgtttgggggtgtggccgtt...
species | Glycine max |
transcript | GLYMA16G26070.2 |
intron # | 7 |
splice site | 5' |
intron type | U2 |
EST: CCAATATATCAAGAACTTATTGAAGGTGGTATCAGAATATGGGTATTCAG TGGAGACACTGATTCAGTAGTTCCTGTAACCGCGTCTCGGTATTCAATCCGEST: gi|10846445|gb|BF071337.1|BF071337
genomic: CCAATATATCAAGAACTTATTGAAGGTGGTATCAGAATATGGGTATTCAGgtatattctg ... ccatctgcagTGGAGACACTGATTCAGTAGTTCCTGTAACCGCGTCTCGGTATTCAATCCG
EST: CCAATATATCAAGAACTTATTGAAGGTGGTATCAGAATATGGGTATTCAG TGGAGACACTGATTCAGTAGTTCCTGTAACCGCGTCTCGGTATTCAATGCGEST: gi|6726211|gb|AW310565.1|AW310565
genomic: CCAATATATCAAGAACTTATTGAAGGTGGTATCAGAATATGGGTATTCAGgtatattctg ... ccatctgcagTGGAGACACTGATTCAGTAGTTCCTGTAACCGCGTCTCGGTATTCAATCCG
EST: CCAATATATCAAGAACTTATTGAAGGTGGTATCAGAATATGGGTATTCAG TGGAGACACTGATTCAGTAGTTCCTGTAACCGCGTCTCGGTATTCAATCCGEST: gi|51336355|gb|CO980221.1|CO980221
genomic: CCAATATATCAAGAACTTATTGAAGGTGGTATCAGAATATGGGTATTCAGgtatattctg ... ccatctgcagTGGAGACACTGATTCAGTAGTTCCTGTAACCGCGTCTCGGTATTCAATCCG
EST: CCAATATATCAAGAACTTATTGAAGGTGGTATCAGAATATGGGTATTCAG TGGAGACACTGATTCAGTAGTTCCTGTAACCGCGTCTCGGTATTCAATCCGEST: gi|208305886|gb|GE109565.1|GE109565
genomic: CCAATATATCAAGAACTTATTGAAGGTGGTATCAGAATATGGGTATTCAGgtatattctg ... ccatctgcagTGGAGACACTGATTCAGTAGTTCCTGTAACCGCGTCTCGGTATTCAATCCG
EST: GAAGGTGGTATCAGAATATGGGTATTCAG TGGAGACACTGATTCAGTAGTTCCTGTAACCGCGTCTCGGTATTCAATCCGEST: gi|15285283|gb|BI469174.1|BI469174
genomic: GAAGGTGGTATCAGAATATGGGTATTCAGgtatattctg ... ccatctgcagTGGAGACACTGATTCAGTAGTTCCTGTAACCGCGTCTCGGTATTCAATCCG
EST: CCAATATATCAAGAACTTATTGAAGGTGGTATCAGAATATGGGTATTCAG TGGAGACACTGATTCAGTAGTTCCTGTAACCGCGTCTCGGTATTCAATCCGEST: gi|58016301|gb|CX703043.1|CX703043
genomic: CCAATATATCAAGAACTTATTGAAGGTGGTATCAGAATATGGGTATTCAGgtatattctg ... ccatctgcagTGGAGACACTGATTCAGTAGTTCCTGTAACCGCGTCTCGGTATTCAATCCG
EST: CCAATATATCAAGAACTTATTGAAGGTGGTATCAGAATATGGGTATTCAG TGGAGACACTGATTCAGTAGTTCCTGTAACCGCGTCTCGGTATTCAATCCG
genomic: CCAATATATCAAGAACTTATTGAAGGTGGTATCAGAATATGGGTATTCAGgtatattctg ... ccatctgcagTGGAGACACTGATTCAGTAGTTCCTGTAACCGCGTCTCGGTATTCAATCCG
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| TGATGTTATTGTGGAAAATTGGGGTGATTCTCCGCTATCTATGCTTCCAATATATCAAGAACTTATTGAAGGTGGTATCAGAATATGGGTATTCAGgtatattctgaaaacccggtgatttcagttattaataagtaactttaatgctgagaatgaattttgcttgtccaaatgtgtgtttgggggtgtggccgtt
- - - - - - - - - - - - - - - - - - - - - - - - - - - - AAGAAC
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - TTGAAG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -gggggtg