1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' |
GATTTCAAAATTCAGAACATTGTCGGCTCTTGTGATGTCAAGTTCCCCATACGGCTGGAGGGTCTTGCATATTCCCATGGTGCTTTCTCAAGTgtaagttttaattttttgggaaaataaattggtccctggtgacttttatatcagaatattttgttttcacaatcaatgtttggctatcctgatgtttagg...
species | Glycine max |
transcript | GLYMA16G25450.2 |
intron # | 7 |
splice site | 5' |
intron type | U2 |
EST: CGGCTGGGGGGTCTTGCATATTCCCATGGTGCTTTCTCAAGT TATGAACCAGAGCTGTTTCCAGGGCTAATCTACCGTATGAAGCAACCTAAAEST: gi|193356193|gb|FK321394.1|FK321394
genomic: CGGCTGGAGGGTCTTGCATATTCCCATGGTGCTTTCTCAAGTgtaagtttta ... gtggtggcagTATGAACCAGAGCTGTTTCCAGGGCTAATCTACCGTATGAAGCAACCTAAA
EST: CGGCTGGGGGGTCTTGCATATTCCCATGGTGCTTTCTCAAGT TATGAACCAGAGCTGTTTCCAGGGCTAATCTACCGTATGAAGCEST: gi|120530268|gb|EH258402.1|EH258402
genomic: CGGCTGGAGGGTCTTGCATATTCCCATGGTGCTTTCTCAAGTgtaagtttta ... gtggtggcagTATGAACCAGAGCTGTTTCCAGGGCTAATCTACCGTATGAAGC
EST: TCCCCATACGGCTGGAGGGTCTTGCATATTCCCATGGTGCTTTCTCAAGT TATGAACCAGAGCTGTTTCCAGGGCTAATCTACCGTATGAAGCAACCTAAAEST: gi|14258923|gb|BG881840.1|BG881840
genomic: TCCCCATACGGCTGGAGGGTCTTGCATATTCCCATGGTGCTTTCTCAAGTgtaagtttta ... gtggtggcagTATGAACCAGAGCTGTTTCCAGGGCTAATCTACCGTATGAAGCAACCTAAA
EST: TCCCCATACGGCTGGAGGGTCTTGCATATTCCCATGGTGCTTTCTCAAGT TATGAACCAGAGCTGTTTCCAGGGCTAATCTACCGTATGAAGCAACCT
genomic: TCCCCATACGGCTGGAGGGTCTTGCATATTCCCATGGTGCTTTCTCAAGTgtaagtttta ... gtggtggcagTATGAACCAGAGCTGTTTCCAGGGCTAATCTACCGTATGAAGCAACCT
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| GATTTCAAAATTCAGAACATTGTCGGCTCTTGTGATGTCAAGTTCCCCATACGGCTGGAGGGTCTTGCATATTCCCATGGTGCTTTCTCAAGTgtaagttttaattttttgggaaaataaattggtccctggtgacttttatatcagaatattttgttttcacaatcaatgtttggctatcctgatgtttagg
- - - - - - - - - - - - - - - - - - - - - - - - - - GCTGGA
- - - - - - - - - - - - - - - - - - - - - - - - - - - TGGAGG