1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' |
CAGACTGGATTCAATTCCTGTTGTACTTGTTATTGATCCCATCACTGGCCAAAAGATGCGCTCTTGGATTGGAATGGTTCAACCTGAAAGCTTATTGGAAgtatgcaatacaattttttaacttactatgatggaaacttttttcttggggagttgaaacattattcatatgtaaatcctgaacttgattgttttacaatacttactgatttgaagagtcttgtgctttactttag
species | Glycine max |
transcript | GLYMA16G18450.1 |
intron # | 7 |
splice site | 5' |
intron type | U2 |
EST: GATTGGAATGGTTCANNNNGAAAGCTTATTGGAA GGTCTACTAGCATTCCTTGATGCAGGGNNNAAGGATCATCATATTACCATGEST: gi|58018629|gb|CX705371.1|CX705371
genomic: GATTGGAATGGTTCAACCTGAAAGCTTATTGGAAgtatgcaata ... tttactttagGGTCTACTAGCATTCCTTGATGCAGGGCCTAAGGATCATCATATTACCATG
EST: AAAAGATGCGCTCTTGGATTGGAATGGTTCAACCTGAAAGCTTATTGGAA GGTCTACTAGCATTCCTTGATGCAGGGCCTAAGGATCATCATATTACCATGEST: gi|208129548|gb|GD932348.1|GD932348
genomic: AAAAGATGCGCTCTTGGATTGGAATGGTTCAACCTGAAAGCTTATTGGAAgtatgcaata ... tttactttagGGTCTACTAGCATTCCTTGATGCAGGGCCTAAGGATCATCATATTACCATG
EST: AAAAGATGCGCTCTTGGATTGGAATGGTTCAACCTGAAAGCTTATTGGAA GGTCTACTAGCATTCCTTGATGCAGGGCCTAAGG
genomic: AAAAGATGCGCTCTTGGATTGGAATGGTTCAACCTGAAAGCTTATTGGAAgtatgcaata ... tttactttagGGTCTACTAGCATTCCTTGATGCAGGGCCTAAGG
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| CAGACTGGATTCAATTCCTGTTGTACTTGTTATTGATCCCATCACTGGCCAAAAGATGCGCTCTTGGATTGGAATGGTTCAACCTGAAAGCTTATTGGAAgtatgcaatacaattttttaacttactatgatggaaacttttttcttggggagttgaaacattattcatatgtaaatcctgaacttgattgttttacaatacttactgatttgaagagtcttgtgctttactttag
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