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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

CTAGGAACAATAATTTCTGGTAGCCAAAACGAGGAACGTCTTAACATGATAAGCTCCAGgtagtgcttgtttacactttccttatctcgttcatatcttcgtactggaagtgccgtgactttctaactcaacctcatggttgatgataatggaagcagg...

Basic information

species Glycine max
transcript GLYMA16G09690.1
intron # 7
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|214009437|gb|DB990643.1|DB990643
EST:     ATAATTTCTGGTAGCCAAAACGAGGAACGTCTTAACATGATAAGCTCCAG                         GATTGATGAGTTAGGCTTGCCACGAGAGAAGTATGAATGGTACCTAGATCT
genomic: ATAATTTCTGGTAGCCAAAACGAGGAACGTCTTAACATGATAAGCTCCAGgtagtgcttg ... tgaatggcagGATTGATGAGTTAGGCTTGCCACGAGAGAAGTATGAATGGTACCTAGATCT
EST: gi|192310196|gb|FK002580.1|FK002580
EST:     ATAATTTCTGGTAGCCAAAACGAGGAACGTCTTAACATGATAAGCTCCAG                         GATTGATGAGTTAGGCTTGCCACGAGAGAAGTATGAATGGTACCTAGATCT
genomic: ATAATTTCTGGTAGCCAAAACGAGGAACGTCTTAACATGATAAGCTCCAGgtagtgcttg ... tgaatggcagGATTGATGAGTTAGGCTTGCCACGAGAGAAGTATGAATGGTACCTAGATCT
EST: gi|192310197|gb|FK002581.1|FK002581
EST:     ATAATTTTTGGTAGCCAAAACGAGGAACGTCTTAACATGATAAGCTCCAG                         GATTGATGAGTTAGGCTTGCCACGAGAGAAGTATGAATGGTACCTAGATTT
genomic: ATAATTTCTGGTAGCCAAAACGAGGAACGTCTTAACATGATAAGCTCCAGgtagtgcttg ... tgaatggcagGATTGATGAGTTAGGCTTGCCACGAGAGAAGTATGAATGGTACCTAGATCT