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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

GAAAGGTGTTGAAATGAATATTTGGGATCTTAACAACTTCACTAAGATCTGGAATTCCAAACCTgtgagtctttacttcaaaccctacttttcatctctgctattaattaacttatcttcctccagtttctcttttgctgctgcacatttttttagtgcatgattttacaaattcttttaacctatgcag

Basic information

species Glycine max
transcript GLYMA16G03840.1
intron # 7
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|207845370|gb|GD817053.1|GD817053
EST:     TGAATATTTGGGATCTTAACAACTTCACTAAGATCTGGAATTCCAAACCT                         CCGCCGAAGGATAACCT
genomic: TGAATATTTGGGATCTTAACAACTTCACTAAGATCTGGAATTCCAAACCTgtgagtcttt ... acctatgcagCCGCCGAAGGATAACCT
EST: gi|193483339|gb|FK450552.1|FK450552
EST:     TGAATATTTGGGATCTTAACAACTTCACTAAGATCTGGAATTCCAAACCT                         CCGCCGAAGGATAACCTCGGTATATTTACACCGACTTGGTTCACATCTGCT
genomic: TGAATATTTGGGATCTTAACAACTTCACTAAGATCTGGAATTCCAAACCTgtgagtcttt ... acctatgcagCCGCCGAAGGATAACCTCGGTATATTTACACCGACTTGGTTCACATCTGCT
EST: gi|207702125|gb|GD681998.1|GD681998
EST:     CTTAACAACTTCACTAAGATCTGGAATTCCAAAACCT                         CCGCCGAAGGATAACCTCGGTATATTTACACCGACTTGGTTCACATCTGC
genomic: CTTAACAACTTCACTAAGATCTGGAATTCC-AAACCTgtgagtcttt ... acctatgcagCCGCCGAAGGATAACCTCGGTATATTTACACCGACTTGGTTCACATCTGC