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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

TAGTCAACACGGCTCCTGGACCCCACATTAGAGGGAACACATTGAGAGCATACTCCATGGGTGATAATGAAGTTGATCTTCTACTTCCCGGTATTGCAAGgttagtttctatgattctgtcaaaccggtttctcttgtgcagaagtgaatagacttacatattatggttgtttctatttcaagggaatcttaaacctgcc...

Basic information

species Glycine max
transcript GLYMA15G05150.2
intron # 7
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|15663521|gb|BI700892.1|BI700892
EST:     TACTCCATGGGTGATAATGAAGTTGATCTTCTACTTCCCGGTATTGCAAG                         GTTGCGGGTGCAGCTTGGAGTAAACATGCCAGCTCAAGCTACTCGCAGGCT
genomic: TACTCCATGGGTGATAATGAAGTTGATCTTCTACTTCCCGGTATTGCAAGgttagtttct ... tgtcactcagGTTGCGGGTGCAGCTTGGAGTAAACATGCCAGCTCAAGCTACTCGCAGGCT
EST: gi|21677331|gb|BQ629682.1|BQ629682
EST:     TACTCCATGGGTGATAATGAAGTTGATCTTCTACTTCCCGGTATTGCAAG                         GTTGCGGGTGCAGCTTGGAGTAAACATGCCAGCTCAAGCTACTCGCAGGCT
genomic: TACTCCATGGGTGATAATGAAGTTGATCTTCTACTTCCCGGTATTGCAAGgttagtttct ... tgtcactcagGTTGCGGGTGCAGCTTGGAGTAAACATGCCAGCTCAAGCTACTCGCAGGCT
EST: gi|8286107|gb|BE023666.1|BE023666
EST:     TACTCCATGGGTGATAATGAAGTTGATCTTCTACTTCCCGGTATTGCAAG                         GTTGCGGGTGCAGCTTGGAGTAAACATGCCAGCTCAAGCTACTCGCAGGCT
genomic: TACTCCATGGGTGATAATGAAGTTGATCTTCTACTTCCCGGTATTGCAAGgttagtttct ... tgtcactcagGTTGCGGGTGCAGCTTGGAGTAAACATGCCAGCTCAAGCTACTCGCAGGCT
EST: gi|193716983|gb|FK654681.1|FK654681
EST:     TACTCCATGGGTGATAATGAAGTTGATCTTCTACTTCCCGGTATTGCAAG                         GTTGCGGGTGCAGCTTGGAGTAAACNTGCCAGCTCAAGCTACTCGCAGGCT
genomic: TACTCCATGGGTGATAATGAAGTTGATCTTCTACTTCCCGGTATTGCAAGgttagtttct ... tgtcactcagGTTGCGGGTGCAGCTTGGAGTAAACATGCCAGCTCAAGCTACTCGCAGGCT
EST: gi|10237549|gb|BE806437.1|BE806437
EST:     ACTTCATGGGTGATAATGAAGTTGATCTTTCTACTTCC-GGTTTTGCAAC                         GTTGCGCGTGCAGCTT
genomic: ACTCCATGGGTGATAATGAAGTTGATCTT-CTACTTCCCGGTATTGCAAGgttagtttct ... tgtcactcagGTTGCGGGTGCAGCTT