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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

TGATAGACATGTTTATGGCTATGAAGTAGTTCCTCAAGCCATCACAGATGCTCATCTTAATGCCAAGATAAATGGAATAAAAAAATGCAACATTTgtccagggagatctcaataaaattgatgagaattttgggaagaattttcctaaacctgacattgtcatttcaggtttcgttgctctaagtttccttattc...

Basic information

species Glycine max
transcript GLYMA15G02550.1
intron # 7
splice site 5'
intron type U2

Orthologous splice sites


 atgc   intronic sequence     ATGC   exonic sequence


upper sequence: GLYMA15G02550.1 (Glycine max), 5'ss of exon 7
lower sequence: LOC_Os01g09750.2 (Oryza sativa), 5'ss of exon 7
TGATAGACATGTTTATGGCTATGAAGTAGTTCCTCAAGCCATCACAGATGCTCATCTTAATGCCAAGATAAATGGAATAAAAAAATGCAACATTTgtccagggagatctcaataaaattgatgagaattttgggaagaattttcctaaacctgacattgtcatttcaggttt-cgttgctctaagtttccttattc------------------------------------------------------------------------------------------------
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-------------------------------------------------------------------CTGAATGGTATCAGCAA-TGCTACATTTGTTCAGGGAGACCTTAATAAAATCAATGAAACATTTGGGAAGGAATTTCCGAAACCTGACATAATCATATCAGgtttgtcttggcacatatctgttagtacatattttttgtagcaattcgagttatccctgatgagtagaatctacaatgctttcactgctttgctagatcctaatagacatcattaaatttgcag