1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' |
TTGTGAACTCCAACCACTTTAATCGCTTGACAAAGCTCTTGGACGATGATAAGGTTTCTGGTAAGATTGTTTATGGAGGCGAAAAGGATGAAAGCAAATTgtaagttctgtatatgctttttggtgtactttattgatgaaatctgaatttaatgaaataaagcaaattgtaagttctgtatatgctttttggcgtactttattgatgaaatctggatttagtgaaatacaatgagatcttgaccctagtatttcttttttctcatttgcag
species | Glycine max |
transcript | GLYMA14G24140.1 |
intron # | 7 |
splice site | 5' |
intron type | U2 |
EST: AAGGTTTCTGGTAAGATTGTTTATGGAGGCGAAAAGGATGAAAGCAAATT GAAGATTAGCCCCACTGTTCTATTGGATGTCCCACGGGACTCTTTGATTATEST: gi|208029739|gb|GD829653.1|GD829653
genomic: AAGGTTTCTGGTAAGATTGTTTATGGAGGCGAAAAGGATGAAAGCAAATTgtaagttctg ... tcatttgcagGAAGATTAGCCCCACTGTTCTATTGGATGTCCCACGGGACTCTTTGATTAT
EST: AAGGTTTCTGGTAAGATTGTTTATGGAGGCGAAAAGGATGAAAGCAAATT GAAGATTAGCCCCACTGTTCTATTGGATGTCCCACGGGACTCTTTGATTAT
genomic: AAGGTTTCTGGTAAGATTGTTTATGGAGGCGAAAAGGATGAAAGCAAATTgtaagttctg ... tcatttgcagGAAGATTAGCCCCACTGTTCTATTGGATGTCCCACGGGACTCTTTGATTAT
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| TTGTGAACTCCAACCACTTTAATCGCTTGACAAAGCTCTTGGACGATGATAAGGTTTCTGGTAAGATTGTTTATGGAGGCGAAAAGGATGAAAGCAAATTgtaagttctgtatatgctttttggtgtactttattgatgaaatctgaatttaatgaaataaagcaaattgtaagttctgtatatgctttttggcgtactttattgatgaaatctggatttagtgaaatacaatgagatcttgaccctagtatttcttttttctcatttgcag
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - TGGAGG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AGGATG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AAGCAA