1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' |
ACCGAAAGATGCATCTGAAAACGACAAGGATAGGGACCATGAAAATAATTACCCTGCCAATCAGCCTGGGAACCATTCTCAGTTGGCTTCAAATGCTTTGgtaaagcaggatttaatgatccccttatgcattatagttggcttttttaattttacgtaacaaaaatctatttgaaagagtaagacaattctatatctgg...
species | Glycine max |
transcript | GLYMA14G21490.1 |
intron # | 7 |
splice site | 5' |
intron type | U2 |
EST: ACCCTGCCAATCAGCCTGGGAACCATTCTCAGTTGGCTTCAAATGCTTTG ATAGAGCGACGAACACTTGACTTTAGTGAATGTGAAACACCAGGCAGGGGTEST: gi|208109088|gb|GD903894.1|GD903894
genomic: ACCCTGCCAATCAGCCTGGGAACCATTCTCAGTTGGCTTCAAATGCTTTGgtaaagcagg ... ttgtttgcagATAGAGCGACGAACACTTGACTTTAGTGAATGTGAAACACCAGGCAGGGGT
EST: ACCCTGCCAATCAGCCTGGGAACCATTCTCAGTTGGCTTCAAATGCTTTG ATAGAGCGACGAACACTTGACTTTAGTGAATGTGAAACACCAGGCAGGGGTEST: gi|24136690|gb|BU927200.1|BU927200
genomic: ACCCTGCCAATCAGCCTGGGAACCATTCTCAGTTGGCTTCAAATGCTTTGgtaaagcagg ... ttgtttgcagATAGAGCGACGAACACTTGACTTTAGTGAATGTGAAACACCAGGCAGGGGT
EST: ACCCTGCCAATCAGCCTGGGAACCATTCTCAGTTGGCTTCAAATGCTTTG ATAGAGCGACGAAEST: gi|193461767|gb|FK426308.1|FK426308
genomic: ACCCTGCCAATCAGCCTGGGAACCATTCTCAGTTGGCTTCAAATGCTTTGgtaaagcagg ... ttgtttgcagATAGAGCGACGAA
EST: ACCCTGCCAATCAGCCTGGGAACCATTCTCAGTTGGCTTCAAATGCTTTG ATAGAGCGACGAACACTTGACTTTAGTGAATGTGAAACACCAGGCAGGGGT
genomic: ACCCTGCCAATCAGCCTGGGAACCATTCTCAGTTGGCTTCAAATGCTTTGgtaaagcagg ... ttgtttgcagATAGAGCGACGAACACTTGACTTTAGTGAATGTGAAACACCAGGCAGGGGT
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| ACCGAAAGATGCATCTGAAAACGACAAGGATAGGGACCATGAAAATAATTACCCTGCCAATCAGCCTGGGAACCATTCTCAGTTGGCTTCAAATGCTTTGgtaaagcaggatttaatgatccccttatgcattatagttggcttttttaattttacgtaacaaaaatctatttgaaagagtaagacaattctatatctgg
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -tcccctt
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - aacaaaaa