1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' |
AATTGAAGTTGCTCAAGTCTGCTGTTTCCTCTTCAGAGAAAGAATACGATCAAATTCAGAAAGATACGGAAGCTATTGAAATGGAATTGGAGAGTGAAAGgtattttttttttttctaaggaggttgattctgtgtcaaatttggaccagggataggattttaaacaagggtttttacatctgcaccaagcaactcgctg...
species | Glycine max |
transcript | GLYMA14G05490.1 |
intron # | 7 |
splice site | 5' |
intron type | U2 |
EST: CAAATTCAGAAAGATACGGAAGCTATTGAAATGGAATTGGAGAGTGAAAG GAGTTTACGGAAGAAGEST: gi|23729771|gb|BU762987.1|BU762987
genomic: CAAATTCAGAAAGATACGGAAGCTATTGAAATGGAATTGGAGAGTGAAAGgtattttttt ... tgttgtgcagGAGTTTACGGAAGAAG
EST: ATTGGAGAGTGAAAG GAGTTTACGGAAGAAGCTTGAGGAAGAACTAAGAGAATTGAACTGCAAAATEST: gi|9203748|gb|BE329972.1|BE329972
genomic: ATTGGAGAGTGAAAGgtattttttt ... tgttgtgcagGAGTTTACGGAAGAAGCTTGAGGAAGAACTAAGAGAATTGAACTGCAAAAT
EST: CAAATTCAGAAAGATACGGAAGCTATTGAAATGGAATTGGAGAGTGAAAG GAGTTTACGGAAGAAGCTTGAGGAAGAACTAAGAGAATTGAACTGCAAAATEST: gi|193415026|gb|FK378810.1|FK378810
genomic: CAAATTCAGAAAGATACGGAAGCTATTGAAATGGAATTGGAGAGTGAAAGgtattttttt ... tgttgtgcagGAGTTTACGGAAGAAGCTTGAGGAAGAACTAAGAGAATTGAACTGCAAAAT
EST: AAATTCAGAAAGATACGGAAGCTATTGAAATGGAATTGGAGAGTGAAAAG GAGTTTACGGAAGAAGCTTGAGGAAGAACTAAGAGAATTGAACTGCAAAAEST: gi|207716445|gb|GD699445.1|GD699445
genomic: AAATTCAGAAAGATACGGAAGCTATTGAAATGGAATTGGAGAGTG-AAAGgtattttttt ... tgttgtgcagGAGTTTACGGAAGAAGCTTGAGGAAGAACTAAGAGAATTGAACTGCAAAA
EST: CAAATTCAGAAAGATACGGAAGCTATTGAAATGGAATTGGAGAGTGAAAG GAGTTTACGGAAGAAGCTTGAGGAAGAACTAAGAGAATTGAACTGCAAAATEST: gi|27424127|gb|CA935647.1|CA935647
genomic: CAAATTCAGAAAGATACGGAAGCTATTGAAATGGAATTGGAGAGTGAAAGgtattttttt ... tgttgtgcagGAGTTTACGGAAGAAGCTTGAGGAAGAACTAAGAGAATTGAACTGCAAAAT
EST: CAAATTCAGAAAGATACGGAAGCTATTGAAATGGAATTGGAGAGTGAAAG GAGTTTACGGAAGAAGCTTGAGGAAGAACTAAGAGAATTGAACTGCAAAATEST: gi|19269212|gb|BM885468.1|BM885468
genomic: CAAATTCAGAAAGATACGGAAGCTATTGAAATGGAATTGGAGAGTGAAAGgtattttttt ... tgttgtgcagGAGTTTACGGAAGAAGCTTGAGGAAGAACTAAGAGAATTGAACTGCAAAAT
EST: CAAATTCAGAAAGATACGGAAGCTATTGAAATGGAATTGGAGAGTGAAAG GAGTTTACGGAAGAAGCTTGAGGAAGAACTAAGAGAATTGAACTGCAAAAT
genomic: CAAATTCAGAAAGATACGGAAGCTATTGAAATGGAATTGGAGAGTGAAAGgtattttttt ... tgttgtgcagGAGTTTACGGAAGAAGCTTGAGGAAGAACTAAGAGAATTGAACTGCAAAAT
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| AATTGAAGTTGCTCAAGTCTGCTGTTTCCTCTTCAGAGAAAGAATACGATCAAATTCAGAAAGATACGGAAGCTATTGAAATGGAATTGGAGAGTGAAAGgtattttttttttttctaaggaggttgattctgtgtcaaatttggaccagggataggattttaaacaagggtttttacatctgcaccaagcaactcgctg
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - TTGGAG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - TGGAGA