1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' |
ATAGTGGATGCTGATCGTCTTTCTGAGCTTCAAGATGCACAAGAAGACAATCAGACCTTGACGAAGCAGTTCCAAGATCTTCAGgtttgtaagtttggattatctaatataatggtctagtaatattttctcgaattgttaagatgcatttgttatagagttcatgtaaaagtttattttcttctgtgtttatttccag
species | Glycine max |
transcript | GLYMA14G05480.1 |
intron # | 7 |
splice site | 5' |
intron type | U2 |
EST: ATGCACAAGAAGACAATCAGACCTTGACGAAGCAGTTCCAAGATCTTCAG AATGAACTGAAAGATGATAAGTATGTGCGCACTTCTCGAATATACTCTTTGEST: gi|151401183|gb|EV270997.1|EV270997
genomic: ATGCACAAGAAGACAATCAGACCTTGACGAAGCAGTTCCAAGATCTTCAGgtttgtaagt ... ttatttccagAATGAACTGAAAGATGATAAGTATGTGCGCACTTCTCGAATATACTCTTTG
EST: ATGCACAAGAAGACAATCAGACCTTGACGAAGCAGTTCCAAGACCTTCAG AATGAACTGAAAGATGATAAGTATGTGCGCACTTCTCGAATATACTCTTTGEST: gi|192323302|gb|FK017063.1|FK017063
genomic: ATGCACAAGAAGACAATCAGACCTTGACGAAGCAGTTCCAAGATCTTCAGgtttgtaagt ... ttatttccagAATGAACTGAAAGATGATAAGTATGTGCGCACTTCTCGAATATACTCTTTG
EST: ATGCACAAGAAGACAATCAGACCTTGACGAAGCAGCTCCAAGATCTTCAG AATGAACTGAAAGATGATAAGTATGTGCGCACTTCTCGAATATACTCTTTG
genomic: ATGCACAAGAAGACAATCAGACCTTGACGAAGCAGTTCCAAGATCTTCAGgtttgtaagt ... ttatttccagAATGAACTGAAAGATGATAAGTATGTGCGCACTTCTCGAATATACTCTTTG
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| ATAGTGGATGCTGATCGTCTTTCTGAGCTTCAAGATGCACAAGAAGACAATCAGACCTTGACGAAGCAGTTCCAAGATCTTCAGgtttgtaagtttggattatctaatataatggtctagtaatattttctcgaattgttaagatgcatttgttatagagttcatgtaaaagtttattttcttctgtgtttatttccag
- - - - - - - - - - - - - - - - - - - - AAGAAG