Skip to another splice site:
1  
 5'  3'   		2  
 5'  3'   		3  
 5'  3'   		4  
 5'  3'   		5  
 5'  3'   		6  
 5'  3'   		7  
 5'  3'   

Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

TGGGAAGATTGGAGAATGGCGTTTTGACAAGAGATATCATCTTTTGGGTCCTCCACCCAAAAACCTCCCCTTACCGCCTCCAGGAGTTCCTGAAACGGTGgtaagtccatacttcaaattttctgggtgtcttgctttgaaattattaatcagttgatgttggaaagttgcaatttcccaaaaagtctatattagaaaat...

Basic information

species Glycine max
transcript GLYMA14G03930.1
intron # 7
splice site 5'
intron type U2

Orthologous splice sites


 atgc   intronic sequence     ATGC   exonic sequence


upper sequence: GLYMA14G03930.1 (Glycine max), 5'ss of exon 7
lower sequence: Vv06s0009g03360.t01 (Vitis vinifera), 5'ss of exon 7
TGGGAAGATTGGAGAATGGCGTTTTGACAAGAGATATCATCTTTTGGGTCCTCCACCCAAAAACCTCCCCTTACCGCCTCCAGGAGTTCCTGAAACGGTGgtaagtccatacttcaaatt---ttctgggtgtcttgctttg-aaattattaatcagtt---gatgttggaaagttgcaatttcccaaaaagtctatattagaaaat
||| |||||||||||||||||||||||||||||||    ||||   || |||||||| || || ||| || |||| ||||| || ||||||||||  |||||| ||| || | | |  ||   | ||    | | || |  | |||  || || ||  |   | ||||  |||  |   || |  ||        |  | ||     
TGGAAAGATTGGAGAATGGCGTTTTGACAAGAGATCATTTCTTAGTGGCCCTCCACCAAAGAATCTCACCCTACCTCCTCCTGGTGTTCCTGAAAGTGTGgtatgtctatgcctaatcttcattcctcaagggcctgttgagtaaaccataaaacaaatccagctgtttcaaa--taacatctggcagtgcactcagctcag-----