Skip to another splice site:
1  
 5'  3'   		2  
 5'  3'   		3  
 5'  3'   		4  
 5'  3'   		5  
 5'  3'   		6  
 5'  3'   		7  
 5'  3'   		8  
 5'  3'   		9  
 5'  3'   		10  
 5'  3'   		11  
 5'  3'   		12  
 5'  3'   		13  
 5'  3'   		14  
 5'  3'   

Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

TCAGAGAAGTTATGACGCCTCTTGTTGATGTTGTTGCAATTGATGCAAGTTCAAGCCTGGTAGACTTTCATCACTTGTGGGTCACACATCAGTACTCAAGgtatttgaagatttcctgatttcaaatttacaatgactttacttttccaatgtgctaactagatcatgaagcgtttcctag

Basic information

species Glycine max
transcript GLYMA14G01920.1
intron # 7
splice site 5'
intron type U2

Orthologous splice sites


 atgc   intronic sequence     ATGC   exonic sequence


upper sequence: GLYMA14G01920.1 (Glycine max), 5'ss of exon 7
lower sequence: Vv19s0090g01820.t01 (Vitis vinifera), 5'ss of exon 7
TCAGAGAAGTTATGACGCCTCTTGTTGATGTTGTTGCAATTGATGCAAGTTCAAGCCTGGTAGACTTTCATCACTTGTGGGTCACACATCAGTACTCAAGgtatttgaagatttc--ctgatttcaaatttacaatgactttacttttc-caatgtgctaactagatcatgaagcgtttcctag
| |||||||| ||||| |||||||| |||||||||||||||||||| ||| |||  || || || || ||| | |||||| | || ||||||||||| ||||||   ||  || |  ||| |||   || |   || |  | | | ||  |         | ||  | |||||     | | ||
TTAGAGAAGTGATGACACCTCTTGTGGATGTTGTTGCAATTGATGCCAGTGCAACACTTGTTGATTTCCATGAATTGTGGCTGACTCATCAGTACTCCAGgtatgataaagttacagctggttt-ggatatgtgattatataattcttaaccccacatctaatattttatgaacatccttccag