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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

TGTCACTGACGTTTTTCCTCAAGTAAGTCTGAACTTTGCTGGCGGTGCATCTATGATTTTAAGGCCACAGGACTACCTGATACAGCAGAATTCTATAgtaagtattcaaacttcaatttctattttttcaattttctgaggactagtctggatttcttgatttccgaagatattgatgtcaagtcagaatgagttgc...

Basic information

species Glycine max
transcript GLYMA12G30430.1
intron # 7
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|19453281|gb|BM954691.1|BM954691
EST:     CATCTATGATTTTAAGGCCACAGGACTACCTGATACAGCAGAATTCTATA                         GGTGGTGCAGCAGTGTGGTGTATTGGT
genomic: CATCTATGATTTTAAGGCCACAGGACTACCTGATACAGCAGAATTCTATAgtaagtattc ... tatgttacagGGTGGTGCAGCAGTGTGGTGTATTGGT
EST: gi|151405324|gb|EV275138.1|EV275138
EST:     CATCTATGATTTTAAGGCCACAGGACTACCTGATACAGCAGAATTCTATA                         GGTGGTGCAGCAGTGTGGTGTATTGGTTTTC
genomic: CATCTATGATTTTAAGGCCACAGGACTACCTGATACAGCAGAATTCTATAgtaagtattc ... tatgttacagGGTGGTGCAGCAGTGTGGTGTATTGGTTTTC
EST: gi|58021743|gb|CX708484.1|CX708484
EST:     CATCTATGATTTTAAGGCCACAGGACTACCTGATACAGCAGAATTCTATA                         GGTGGTGCAGCAGTGTGGTGTATTGGTTTTCAGAAAATCCAGGGTCAAGGG
genomic: CATCTATGATTTTAAGGCCACAGGACTACCTGATACAGCAGAATTCTATAgtaagtattc ... tatgttacagGGTGGTGCAGCAGTGTGGTGTATTGGTTTTCAGAAAATCCAGGGTCAAGGG