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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

TCTCAAATTTCGTGGCAAACAGATTCTCAAGCTCAATGGACCTGATGATGCTACCTTACTTCTCAATACCGTCATATTCAACACCTTTGTATTTTGCCAGgtaatagatcagtnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn...

Basic information

species Glycine max
transcript GLYMA12G01360.1
intron # 7
splice site 5'
intron type U2

Orthologous splice sites


 atgc   intronic sequence     ATGC   exonic sequence


upper sequence: GLYMA12G01360.1 (Glycine max), 5'ss of exon 7
lower sequence: GRMZM2G305159_T02 (Zea mays), 5'ss of exon 7
---TCTCAAATTTCGTGGCAAACAGATTCTCAAGCTCAATGGACCTGATGATGCTACCTTACTTCTCAATACCGTCATATTCAACACCTTTGTATTTTGCCAGgtaatagatcagtnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn--
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TACTCTCATGTTTAATGGGAAGAGGATCCTTAACATCGAAGGCCCAAATGCTGATAG---AACTATCAATACCCTCATATTCAACTCTTTTGTGTTTTGCCAGgtat--gactagttcaagccaccttttctgatacctaatgcttgcaatttgtgaagctttgacattggcttactcagtagcagtaagtagcaaattcaacta