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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

AGATGTCATTACCTGCTCTCCCAACTTCTTCTCAGACATTAAAAAATAATGgtgagtcccattttgaagtgtgttataaattaatactattctggctgtcagttgacgaatttaatatatatctttaaatgtttcaagttttgtagcattg...

Basic information

species Glycine max
transcript GLYMA12G01200.1
intron # 7
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|51343854|gb|CO984587.1|CO984587
EST:     GATGTCATTACCTGCTCTCCCAACTTCTTCTCAGACATTAAAAAATAATG                         GTTGTACTTCTGATGGAGTGGGATTGCTTGTGCTTATTTTTTCATCTTTCA
genomic: GATGTCATTACCTGCTCTCCCAACTTCTTCTCAGACATTAAAAAATAATGgtgagtccca ... gattttgcagGTTGTACTTCTGATGGAGTGGGATTGCTTGTGCTTATTTTTTCATCTTTCA
EST: gi|208140674|gb|GD938712.1|GD938712
EST:     GATGTCATTACCTGCTCTCCCAACTTCTTCTCAGACATTAAAAAATAATG                         GTTGTACTTCTGATGGAGTGGGATTGCTTGTGCTTATTTTTTCTATCTTTC
genomic: GATGTCATTACCTGCTCTCCCAACTTCTTCTCAGACATTAAAAAATAATGgtgagtccca ... gattttgcagGTTGTACTTCTGATGGAGTGGGATTGCTTGTGCTTATTTTTTC-ATCTTTC
EST: gi|19269577|gb|BM885833.1|BM885833
EST:     GATGTCATTACCTGCTCTCCCAACTTCTTCTCAGACATTAAAAAATAATG                         GTTGTACTTCTGATGGAGTGGGATTGCTTGTGCTTATTTTTTCATCTTTCA
genomic: GATGTCATTACCTGCTCTCCCAACTTCTTCTCAGACATTAAAAAATAATGgtgagtccca ... gattttgcagGTTGTACTTCTGATGGAGTGGGATTGCTTGTGCTTATTTTTTCATCTTTCA