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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

ACTTAATTCTCTTGAAGAGTGTACGAAAGACATTAAAGGAGCTAAAGTTGAGAACAATAAATTTTGTGTATCTGTGCACTACCGGAATGTAGATGAAAAGgttataggcttgtgttcttatgcttaataattttctgctaacttgatttgcctttttcctaatttattaccattgctatgtttctaaatatttttcttttcaatttaataatacag

Basic information

species Glycine max
transcript GLYMA12G00790.1
intron # 7
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|13125626|gb|BG316196.1|BG316196
EST:     AGAACAATAAATTTTGTGTATCTGTGCACTACCGGAATGTAGATGAAAAG                         TATTGGGATTTGGTGGGGCAACATGTTCATGATGTTCTGAAGGGTTATCCG
genomic: AGAACAATAAATTTTGTGTATCTGTGCACTACCGGAATGTAGATGAAAAGgttataggct ... aataatacagTATTGGGATTTGGTGGGGCAACATGTTCATGATGTTCTGAAGGGTTATCCG
EST: gi|15287889|gb|BI471780.1|BI471780
EST:     GAACAATAAATTTTGTGTATCTGTGCACTACCGGAATGTAGATGAAAAG                         TATTGGGATTTGGTGGGGCAACATGTTCATGATGTTCTGAAGGGTTATCCG
genomic: GAACAATAAATTTTGTGTATCTGTGCACTACCGGAATGTAGATGAAAAGgttataggct ... aataatacagTATTGGGATTTGGTGGGGCAACATGTTCATGATGTTCTGAAGGGTTATCCG
EST: gi|10234926|gb|BE803814.1|BE803814
EST:     AGAACAATAAATTTTGTGTATCTGTGCACTACCGGAATGTAGATGAAAAG                         TATTGGGATTTGGTGGGGCAACATGTTCATGATGTTCTGAAGGGTTATCCG
genomic: AGAACAATAAATTTTGTGTATCTGTGCACTACCGGAATGTAGATGAAAAGgttataggct ... aataatacagTATTGGGATTTGGTGGGGCAACATGTTCATGATGTTCTGAAGGGTTATCCG
EST: gi|22929040|gb|BU546179.1|BU546179
EST:     GGAATGTAGATGAAAAG                         TATTGGGATTTGGTGGGGCAACATGTTCATGATGTTCTGAAGGGTTATCCG
genomic: GGAATGTAGATGAAAAGgttataggct ... aataatacagTATTGGGATTTGGTGGGGCAACATGTTCATGATGTTCTGAAGGGTTATCCG