1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' |
GTTCGATTAGTTGCTGACAAAGATATAAATAAGCCCAGGGGTTATGCTTTCATTGAGTATCTGCATACAAGAGACATGAAAGgttgagactgattgcttaatttgtttattatcactacggcttttaattcacatctttggttaattttgcag
species | Glycine max |
transcript | GLYMA11G07200.2 |
intron # | 7 |
splice site | 5' |
intron type | U2 |
EST: GCCCAGGGGTTATGCTTTCATTGAGTATCTGCATACAAGAGACATGAAAG CTGCTTATAAACAAGCTGATGGTAGGAAAATTGATGGTAGAAGGGTGCTTGEST: gi|208104023|gb|GD903538.1|GD903538
genomic: GCCCAGGGGTTATGCTTTCATTGAGTATCTGCATACAAGAGACATGAAAGgttgagactg ... aattttgcagCTGCTTATAAACAAGCTGATGGTAGGAAAATTGATGGTAGAAGGGTGCTTG
EST: GCCCAGGGGTTATGCTTTCATTGAGTATCTGCATACAAGAGACATGAAAG CTGCTTATAAACAAGCTGATGGTAGGAAAATTGATGGTAGAAGAGTGCTTGEST: gi|193585274|gb|FK540773.1|FK540773
genomic: GCCCAGGGGTTATGCTTTCATTGAGTATCTGCATACAAGAGACATGAAAGgttgagactg ... aattttgcagCTGCTTATAAACAAGCTGATGGTAGGAAAATTGATGGTAGAAGGGTGCTTG
EST: GCCCAGGGGTTATGCTTTCATTGAGTATCTGCATACAAGAGACATGAAAG CTGCTTATAAACAAGCTGATGGTAGGAAAATTGATGGTAGAAGGGTGCTTGEST: gi|208195617|gb|GD991252.1|GD991252
genomic: GCCCAGGGGTTATGCTTTCATTGAGTATCTGCATACAAGAGACATGAAAGgttgagactg ... aattttgcagCTGCTTATAAACAAGCTGATGGTAGGAAAATTGATGGTAGAAGGGTGCTTG
EST: GCCCAGGGGTTATGCTTTCATTGAGTATCTGCATACAAGAGACATGAAAG CTGCTTATAAACAAGCTGATGGTAGGAAAATTGATGGTAGAAGGGTGCTTGEST: gi|26058824|gb|CA801738.1|CA801738
genomic: GCCCAGGGGTTATGCTTTCATTGAGTATCTGCATACAAGAGACATGAAAGgttgagactg ... aattttgcagCTGCTTATAAACAAGCTGATGGTAGGAAAATTGATGGTAGAAGGGTGCTTG
EST: GCCCAGGGGTTATGCTTTCATTGAGTATCTGCATACAAGAGACATGAAAG CTGCTTATAAACAAGCTGATGGTAGGAAAATTGATGGTAGAAGGGTGCTTG
genomic: GCCCAGGGGTTATGCTTTCATTGAGTATCTGCATACAAGAGACATGAAAGgttgagactg ... aattttgcagCTGCTTATAAACAAGCTGATGGTAGGAAAATTGATGGTAGAAGGGTGCTTG
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| GTTCGATTAGTTGCTGACAAAGATATAAATAAGCCCAGGGGTTATGCTTTCATTGAGTATCTGCATACAAGAGACATGAAAGgttgagactgattgcttaatttgtttattatcactacggcttttaattcacatctttggttaattttgcag
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AAGAGA