1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' |
GTGCTTGGGACTGATGAACTGAATGCATATCTTAATAAGTATCATCTGGAGCTTGATCCTCAACTTGATGCACTTGTTGGAAGgtatcatcaaacatttgatcttacgtatttcactgtaaaattgatttatttattattaaatatgaacttctgtgggagactgagagtgtaacattacatc...
species | Glycine max |
transcript | GLYMA11G05340.2 |
intron # | 7 |
splice site | 5' |
intron type | U2 |
EST: AATAAGTATCATCTGGAGCTTGATCCTCAACTTGATGCACTTGTTGGAAG ACACAGTCGAAAACCCTGGTCCAAATTTATCAATGCAGATAATCAGCATCTEST: gi|208215776|gb|GE008544.1|GE008544
genomic: AATAAGTATCATCTGGAGCTTGATCCTCAACTTGATGCACTTGTTGGAAGgtatcatcaa ... tctgttgcagACACAGTCGAAAACCCTGGTCCAAATTTATCAATGCAGATAATCAGCATCT
EST: AATAAGTATCATCTGGAGCTTGATCCTCAACTTGATGCACTTGTTGGAAG ACACAGTCGAAAACCCTGGTCCAAATTTATCAATGCAGATAATCAGCAT
genomic: AATAAGTATCATCTGGAGCTTGATCCTCAACTTGATGCACTTGTTGGAAGgtatcatcaa ... tctgttgcagACACAGTCGAAAACCCTGGTCCAAATTTATCAATGCAGATAATCAGCAT
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| GTGCTTGGGACTGATGAACTGAATGCATATCTTAATAAGTATCATCTGGAGCTTGATCCTCAACTTGATGCACTTGTTGGAAGgtatcatcaaacatttgatcttacgtatttcactgtaaaattgatttatttattattaaatatgaacttctgtgggagactgagagtgtaacattacatc
- - - - - - - - - - - - - - - - - - - - - - - GGAGCT
- - - - - - - - - - - - - - - - - - - - - - - - GAGCTT
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - TGGAAG