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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

AGGAGCCTTTGGGAGAATGCTTGGCGTACCTGCATGGAAAGGCAACATGGTCAAAAATCTCATCCTGCTAACCCAGAAACACCTCTGCAATCAAGATCTGgtatctcttgtgacatagctttttctctggttttgttttttgacttgtttggtaactcctgataattgagatctgcag

Basic information

species Glycine max
transcript GLYMA11G03650.1
intron # 7
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|254319467|gb|GR830718.1|GR830718
EST:     TCAAAAATCTCATCCTGCTAACCCAGAAACACCTCTGCAATCAAGATCTG                         TTGCTAGAACCTCTGATTTGCCACATAAGCAAAGTGCTGCTCAAGGAAAAG
genomic: TCAAAAATCTCATCCTGCTAACCCAGAAACACCTCTGCAATCAAGATCTGgtatctcttg ... agatctgcagTTGCTAGAACCTCTGATTTGCCACATAAGCAAAGTGCTGCTCAAGGAAAAG
EST: gi|254320673|gb|GR827122.1|GR827122
EST:     TCAAAAATCTCATCCTGCTAACCCAGAAACA-CTCTGCAATCAAGATCTG                         TTGCTAGAACCTCTGATTTGCCACATAAGCAAAGTGCTGCTCAAGGAAAAG
genomic: TCAAAAATCTCATCCTGCTAACCCAGAAACACCTCTGCAATCAAGATCTGgtatctcttg ... agatctgcagTTGCTAGAACCTCTGATTTGCCACATAAGCAAAGTGCTGCTCAAGGAAAAG
EST: gi|254331094|gb|GR842359.1|GR842359
EST:     TCAAAAATCTCATCCTGCTAACCCAGAAACACCTCTGCAATCAAGATCTG                         TTGCTAGAACCTCTGATTTGCCACATAAGCAAAGTGCTGCTCAAGGAAAAG
genomic: TCAAAAATCTCATCCTGCTAACCCAGAAACACCTCTGCAATCAAGATCTGgtatctcttg ... agatctgcagTTGCTAGAACCTCTGATTTGCCACATAAGCAAAGTGCTGCTCAAGGAAAAG
EST: gi|207836141|gb|GD808770.1|GD808770
EST:     TCAAAAATCTCATCCTGCTAACCCAGAAACACCTCTGCAATCAAGATCTG                         TTGCTAGAACCTCTGATTTGCCACATAAGCAAAGTGCTGCTCAAGGAAAAG
genomic: TCAAAAATCTCATCCTGCTAACCCAGAAACACCTCTGCAATCAAGATCTGgtatctcttg ... agatctgcagTTGCTAGAACCTCTGATTTGCCACATAAGCAAAGTGCTGCTCAAGGAAAAG
EST: gi|254331095|gb|GR842360.1|GR842360
EST:     TCAAAAATCTCATCCTGCTAACCCAGAAACACCTCTGCAATCAAGATCTG                         TTGCTAGAACCTCTGATTTGCCACATAAGCAAAGTGCTGCTCAAGGAAAAG
genomic: TCAAAAATCTCATCCTGCTAACCCAGAAACACCTCTGCAATCAAGATCTGgtatctcttg ... agatctgcagTTGCTAGAACCTCTGATTTGCCACATAAGCAAAGTGCTGCTCAAGGAAAAG