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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

GAGTGCTGTATTCTCAGCTAGCTCATCTTCTGAGGACAAGCTAGAACCGACAACCTCTTCTAGTGACGTGGCTTCCCATTAGTTTTGTTTACAATTCAAGgtactgctaattgctctctgaatttccctgcataataaatgtggatagacttttaacaagttgataaacttcttctttggctccattttgtgcctcaag

Basic information

species Glycine max
transcript GLYMA11G01780.1
intron # 7
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|151403084|gb|EV272894.1|EV272894
EST:     CAACCTCTTCTAGTGACGTGGCTTCCCATTAGTTTTGTTTACAATTCAAG                         ATTTGAACTGTAGGTAATA-GAATAGACGTGGCCAGCTGG
genomic: CAACCTCTTCTAGTGACGTGGCTTCCCATTAGTTTTGTTTACAATTCAAGgtactgctaa ... gtgcctcaagATTTGAACTGTAGGTAATAAGAATAGACGTGGCCAGCTGG
EST: gi|17022795|gb|BM093829.1|BM093829
EST:     CAACCTCTTCTAGTGACGTGGCTTCCCATTAGTTTTGTTTACAATTCAAG                         ATTTGAACTGTAGGTAATAAGAATAGACGTGGCCAGCTGGGGATAATTTTT
genomic: CAACCTCTTCTAGTGACGTGGCTTCCCATTAGTTTTGTTTACAATTCAAGgtactgctaa ... gtgcctcaagATTTGAACTGTAGGTAATAAGAATAGACGTGGCCAGCTGGGGATAATTTTT