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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

TGCTTTGGTGTTCATGTGAGAGGGTCAGAGTATATTCCACTTCTTGGATCCAACGATCCAAGTTCTTTCTTAGTGGGAGTTCCAGATATTGAACTATGAGgtattgtattcattcctgagtcctagtttagtctgggttttttttttttgcaatgtgttcctttctattgaaagaaggtttccttatcttacaccag

Basic information

species Glycine max
transcript GLYMA11G01340.1
intron # 7
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|214009393|gb|DB988618.1|DB988618
EST:     AACGATCCAAGTTCGTTT-GTAGTGGGAGTTCCAGATATTGAACTATGAG                         TTATGCATTGGACGCTTTGTGAGATCCATGTAAATGAGAGAATAGTCTGCT
genomic: AACGATCCAAGTTC-TTTCTTAGTGGGAGTTCCAGATATTGAACTATGAGgtattgtatt ... cttacaccagTTATGCATTGGACGCTTTGTGAGATCCATGTAAATGAGAGAATAGTCTGCT
EST: gi|51343237|gb|CO983970.1|CO983970
EST:     CAACGATCCAAGTTCTTTCTTAGTGGGAGTTCCAGATATTGAACTATGAG                         TTATGCATTGGACGCTTTGTGAGATCCATGTAAATGAGAGAATAGTCTGCT
genomic: CAACGATCCAAGTTCTTTCTTAGTGGGAGTTCCAGATATTGAACTATGAGgtattgtatt ... cttacaccagTTATGCATTGGACGCTTTGTGAGATCCATGTAAATGAGAGAATAGTCTGCT