Skip to another splice site:
1  
 5'  3'   
2  
 5'  3'   
3  
 5'  3'   
4  
 5'  3'   
5  
 5'  3'   
6  
 5'  3'   
7  
 5'  3'   
8  
 5'  3'   
9  
 5'  3'   
10  
 5'  3'   

Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

CTGGCATTTGGAGCTAAACGCTGGGTAGCTACATTAGACAGACAATGCGAACGTCTTGCCAGTTCAATGGCCAACAACATTCCAGCAGGGGACCTATGTGgtatgtgatcggctggagtgtgattttgtttttttgttaatttccaattaatctcaaatatatatatatgcatgcag

Basic information

species Glycine max
transcript GLYMA11G00570.1
intron # 7
splice site 5'
intron type U2

Orthologous splice sites


 atgc   intronic sequence     ATGC   exonic sequence


upper sequence: GLYMA11G00570.1 (Glycine max), 5'ss of exon 7
lower sequence: Vv10s0116g00680.t01 (Vitis vinifera), 5'ss of exon 7
CTGGCATTTGGAGCTAAACGCTGGGTAGCTACATTAGACAGACAATGCGAACGTCTTGCCAGTTCAATGGCCAACAACATTCCAGCAGGGGACCTATGTGgtatgtgat----cggctggagtgtg-attttgtttttttgttaatttcc---aattaat---ctcaaatatatatatatgcat--gcag-------
|| ||||||||||| || |||||||| ||||| |||| | |||||||||||||| || ||| | ||||||| ||||||||| ||||| || | |||||| ||| | | | | || | | || | | ||||| ||||||| ||| | | | ||| | || | |
CTTGCATTTGGAGCAAAGCGCTGGGTGGCTACCCTAGATCGCCAATGCGAACGTCTAGCAAGTGCCATGGCCAGCAACATTCCTGCAGGAGATGTTGGTGgtaatggatatttcttttcatctttacatgatatcttgtcaccagtttccttaaattaatttcctccattgttgttattttgattggtggtgtacag