Skip to another splice site:
1  
 5'  3'   		2  
 5'  3'   		3  
 5'  3'   		4  
 5'  3'   		5  
 5'  3'   		6  
 5'  3'   		7  
 5'  3'   		8  
 5'  3'   		9  
 5'  3'   

Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

GCTCAGATAATGCTAGGAATGGTGACTTCCCAAGTGgtttgttttactaccttttcacttgattttcattccttttatattttatgccaaatcatgtcatccaggacataagagggtgctttagggtgtgccataa...

Basic information

species Glycine max
transcript GLYMA10G36350.1
intron # 7
splice site 5'
intron type U2

Orthologous splice sites


 atgc   intronic sequence     ATGC   exonic sequence


upper sequence: GLYMA10G36350.1 (Glycine max), 5'ss of exon 7
lower sequence: Vv18s0001g01800.t01 (Vitis vinifera), 5'ss of exon 7
GCTCAGATAATGCTAGGAATGGTGACTTCCCAAGTGgtttgttttactaccttttcacttgattttcattccttttatattttatgccaaatcatgtcatccaggacataagagggtgctttagggtgtgccataa
|| |||||||||||||||||||||||| | |||||||||||||| | |||||    |  |  | | |  || |||  ||||  |  |   |  ||  |||    || |  |     |  || |   ||        
GCGCAGATAATGCTAGGAATGGTGACTCCTCAAGTGgtttgtttcattacctc--aaactattgtgcgatcatttattattcaacacttga--attgcatgacagatactatgtaatctttgaacttgcag-----