1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' |
AGAAGAATGGTATGTTTTTCATAGAGACATCTGCAAAGACAGCAGATAATATAAATGAACTGTTTGAGgtatgtttgatgttttcttccttacagttattagattataaaattaatcatgacattttgtatttggcaagaatgagaatgtacgaacaatggaaaatag...
species | Glycine max |
transcript | GLYMA10G35230.3 |
intron # | 7 |
splice site | 5' |
intron type | U2 |
EST: TCATAGAGACATCTGCAAAGACAGCAGATAATATAAATGAACTGTTTGAG GAAATTGCCAAAAGACTGCCTCGCCCATCAGTTAGTTGATGTAGCCAGATAEST: gi|7587998|gb|AW703803.1|AW703803
genomic: TCATAGAGACATCTGCAAAGACAGCAGATAATATAAATGAACTGTTTGAGgtatgtttga ... cttttcacagGAAATTGCCAAAAGACTGCCTCGCCCATCAGTTAGTTGATGTAGCCAGATA
EST: TCATAGAGACATCTGCAAAGACAGCAGATAATATAAATGAACTGTTTGAG GAAATTGCCAAAAGACTGCCTCGCCCATCAGTTAGTTGATGTAGCCAGATAEST: gi|207709348|gb|GD691040.1|GD691040
genomic: TCATAGAGACATCTGCAAAGACAGCAGATAATATAAATGAACTGTTTGAGgtatgtttga ... cttttcacagGAAATTGCCAAAAGACTGCCTCGCCCATCAGTTAGTTGATGTAGCCAGATA
EST: TCATAGAGACATCTGCAAAGACAGCAGATAATATAAATGAACTGTTTGAG GAAATTGCCAAAAGACTGCCTCGCCCATCAGTTAGTTGATGTAGCCAGATAEST: gi|208190741|gb|GD991389.1|GD991389
genomic: TCATAGAGACATCTGCAAAGACAGCAGATAATATAAATGAACTGTTTGAGgtatgtttga ... cttttcacagGAAATTGCCAAAAGACTGCCTCGCCCATCAGTTAGTTGATGTAGCCAGATA
EST: TCATAGAGACATCTGCAAAGACAGCAGATAATATAAATGAACTGTTTGAG GAAATTGCCAAAAGACTGCCTCGCCCATCAGTTAGTTGATGTAGCCAGATA
genomic: TCATAGAGACATCTGCAAAGACAGCAGATAATATAAATGAACTGTTTGAGgtatgtttga ... cttttcacagGAAATTGCCAAAAGACTGCCTCGCCCATCAGTTAGTTGATGTAGCCAGATA
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| AGAAGAATGGTATGTTTTTCATAGAGACATCTGCAAAGACAGCAGATAATATAAATGAACTGTTTGAGgtatgtttgatgttttcttccttacagttattagattataaaattaatcatgacattttgtatttggcaagaatgagaatgtacgaacaatggaaaatag
- - - - - - - - - - - - - - - - GCAAAG
- - - - - - - - - - - - - - - - - - - - GCAGAT
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -ggaaaata