1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' |
CTTGCTAACATCATGGGTCGCTCTCAGTGGCTAACGTGTCCAAGGAAGgtagctctgtaatatacataactaattgatatattgtaaggcattattcaacaaaaaactgactaatgctcacatctctttgggaacaacattcag
species | Glycine max |
transcript | GLYMA10G32660.1 |
intron # | 7 |
splice site | 5' |
intron type | U2 |
EST: CTTGCTAACATCATGGGTCGCTCTCAGTGGCTAACGTGTCCAAGGA-- --TTTGTCAACTGGTTGGCTTCACTGTGATCCTGGTCCACTGTTTAAGCCAEST: gi|22929840|gb|BU546979.1|BU546979
genomic: CTTGCTAACATCATGGGTCGCTCTCAGTGGCTAACGTGTCCAAGGAAGgtagctctgt ... caacattcagGATTTGTCAACTGGTTGGCTTCACTGTGATCCTGGTCCACTGTTTAAGCCA
EST: TGCTTGCTAACATCATGNNTCGCNNNCAGTGGCTAACGTGTCCAAGGAAG GATTTGTCAACTGGNNNGCTTCACTGTGATCCTGGTCCACTGNNNAAGCCAEST: gi|31561270|gb|CD487108.1|CD487108
genomic: TGCTTGCTAACATCATGGGTCGCTCTCAGTGGCTAACGTGTCCAAGGAAGgtagctctgt ... caacattcagGATTTGTCAACTGGTTGGCTTCACTGTGATCCTGGTCCACTGTTTAAGCCA
EST: CTTGCTAACATCATGGGTCGCTCTCAGTGGCTAACGTGTCCAAGGAAG GATTTGTCAACTGGTTGGCTTCACTGTGATCCTGGTCCACTGTTTAAGCCA
genomic: CTTGCTAACATCATGGGTCGCTCTCAGTGGCTAACGTGTCCAAGGAAGgtagctctgt ... caacattcagGATTTGTCAACTGGTTGGCTTCACTGTGATCCTGGTCCACTGTTTAAGCCA
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| CTTGCTAACATCATGGGTCGCTCTCAGTGGCTAACGTGTCCAAGGAAGgtagctctgtaatatacataactaattgatatattgtaaggcattattcaacaaaaaactgactaatgctcacatctctttgggaacaacattcag
- - - - - - - - - - - - - - - - - - - - AAGGAA