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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

GAAGCTAATAAACCCCCTGATAGTTGGTTTGAATTAAAGATCAATACACATGTTTATGTCACTGGGTTGCCTGAGGACGTTACCACTGATGAAgtaagtatcaacttttcgcccaaatttgcctgaatgtaatttttgttgctataattaacatgacatgggtaatgtattgcag

Basic information

species Glycine max
transcript GLYMA10G31450.1
intron # 7
splice site 5'
intron type U2

Orthologous splice sites


 atgc   intronic sequence     ATGC   exonic sequence


upper sequence: GLYMA10G31450.1 (Glycine max), 5'ss of exon 7
lower sequence: Vv00s0499g00010.t01 (Vitis vinifera), 5'ss of exon 6
GAAGCTAATAAACCCCCTGATAGTTGGTTTGAATTAAAGATCAATACACATGTTTATGTCACTGGGTTGCCTGAGGACGTTACCACTGATGAAgtaagt--atcaacttttcgcccaaatttgcctgaatgtaatttttgttgctataattaacatgacatgggtaat-gtattgcag-------------------
|||||||| ||||| |||||||||||||| || |||||  | ||||||||||||||||| || |||||||| || || |||||   ||| || |||||    |||| ||| |    |  | ||   |||| | ||| || || || | | || |||      | |||| | | ||                      
GAAGCTAACAAACCTCCTGATAGTTGGTTCGATTTAAAAGTTAATACACATGTTTATGTGACCGGGTTGCCAGATGATGTTACTGTTGACGAGgtaagacggtcaattttgcttttatctctg---gaatatgattcttatt-ctgtgactagcattcacaagataatagcactgtttctagtgttgcttatctcct