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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

ACACCCGAGCAAGCCCAGGAAGTCCATGCAGCTGTTCGTGACTGGCTTAAGAAGAATGTATCGGCTGAAGTTTCATCTAAAACGCGAATTATTTATGGAGgtacattggcttttgtaactatgcatgctgcatttgttagtgtcagaaatttaagattcagtttaataagattgcaagctttgttcaaagtggtgtaatc...

Basic information

species Glycine max
transcript GLYMA10G06740.1
intron # 7
splice site 5'
intron type U2

Orthologous splice sites


 atgc   intronic sequence     ATGC   exonic sequence


upper sequence: GLYMA10G06740.1 (Glycine max), 5'ss of exon 7
lower sequence: Vv03s0038g01780.t01 (Vitis vinifera), 5'ss of exon 7
ACACCCGAGCAAGCCCAGGAAGTCCATGCAGCTGTTCGTGACTGGCTTAAGAAGAATGTATCGGCTGAAGTTTCATCTAAAACGCGAATTATTTATGGAGgtacattggcttt--tgtaactatgcatgctgcatttgttagtgtcagaaatttaagattcagtttaataagattgcaagctttgttcaaagtgg-tgtaatc
||||||  ||| || |||||||| ||   |||||||||||| |||||||| |||||||| || ||||||||| | |||||||| |||||||||||||||||||  ||   | |  || |  | |    |  | |  ||   ||    ||||| |  |||    ||| ||    || |||    |  | | | |   ||| |  
ACACCCCTGCAGGCACAGGAAGTACACATAGCTGTTCGTGATTGGCTTAAAAAGAATGTCTCAGCTGAAGTTGCTTCTAAAACACGAATTATTTATGGAGgtattttatttctactgcagttttctgagtggtaactgcatgtacttgaaatatt-gataattttttatgttctttcaaatacttattatattacctgtta--
















Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|14205769|gb|BG839447.1|BG839447
EST:     GAAGAATGTATCGGCTGAAGTTTCATCTAAAACGCGAATTATTTATGGAG                         GGTCTGTAAATGCGAGCAACAGTGCTGAGCTCGCGAAGCAAGAAGATATTG
genomic: GAAGAATGTATCGGCTGAAGTTTCATCTAAAACGCGAATTATTTATGGAGgtacattggc ... tgtccttcagGGTCTGTAAATGCGAGCAACAGTGCTGAGCTCGCGAAGCAAGAAGATATTG
EST: gi|9258593|gb|BE346740.1|BE346740
EST:     GAAGAATGTATCGGCTGAAGTTTCATCTAAAACGCGAATTATTTATGGAG                         GGTCTGTAAATGCGAGCAACAGTGCTGAGCTCGCGAAGCAAGAAGATATTG
genomic: GAAGAATGTATCGGCTGAAGTTTCATCTAAAACGCGAATTATTTATGGAGgtacattggc ... tgtccttcagGGTCTGTAAATGCGAGCAACAGTGCTGAGCTCGCGAAGCAAGAAGATATTG
EST: gi|207842342|gb|GD814614.1|GD814614
EST:     GAAGAATGTATCGGCTGAAGTTTCATCTAAAACGCGAATTATTTATGGAG                         GGTCTGTAAATGCGAGCAACAGTGCTGAGCTCGCGAAGCAAGAAGATATTG
genomic: GAAGAATGTATCGGCTGAAGTTTCATCTAAAACGCGAATTATTTATGGAGgtacattggc ... tgtccttcagGGTCTGTAAATGCGAGCAACAGTGCTGAGCTCGCGAAGCAAGAAGATATTG
EST: gi|193688729|gb|FK629666.1|FK629666
EST:     GAAGAATGTATCGGCTGAAGTTTCATCTAAAACGCGAATTATTTATGGAG                         GGTCTGTAAATGCGAGCAACAGTGCTGAGCTCGCGAAGCAAGAAGATATTG
genomic: GAAGAATGTATCGGCTGAAGTTTCATCTAAAACGCGAATTATTTATGGAGgtacattggc ... tgtccttcagGGTCTGTAAATGCGAGCAACAGTGCTGAGCTCGCGAAGCAAGAAGATATTG
EST: gi|193640974|gb|FK593177.1|FK593177
EST:     GAAGAATGTATCGGCTGAAGTTTCATCTAAAACGCGAATTATTTATGGAG                         GGTCTGTAAATGCGAGCAACAGTGCTGAGCTCGCGAAGCAAGAAGATATTG
genomic: GAAGAATGTATCGGCTGAAGTTTCATCTAAAACGCGAATTATTTATGGAGgtacattggc ... tgtccttcagGGTCTGTAAATGCGAGCAACAGTGCTGAGCTCGCGAAGCAAGAAGATATTG
EST: gi|208048650|gb|GD847553.1|GD847553
EST:     GAAGAATGTATCGGCTGAAGTTTCATCTAAAACGCGAATTATTTATGGAG                         GGTCTGTAAATGCGAGCAACAGTGCTGAGCTCGCGAAGCAAGAAGATATTG
genomic: GAAGAATGTATCGGCTGAAGTTTCATCTAAAACGCGAATTATTTATGGAGgtacattggc ... tgtccttcagGGTCTGTAAATGCGAGCAACAGTGCTGAGCTCGCGAAGCAAGAAGATATTG
EST: gi|208141909|gb|GD940479.1|GD940479
EST:     GAAGAATGTATCGGCTGAAGTTTCATCTAAAACGCGAATTATTTATGGAG                         GGTCTGTAAATGCGAGCAACAGTGCTGAGCTCGCGAAGCAAGAAGATATTG
genomic: GAAGAATGTATCGGCTGAAGTTTCATCTAAAACGCGAATTATTTATGGAGgtacattggc ... tgtccttcagGGTCTGTAAATGCGAGCAACAGTGCTGAGCTCGCGAAGCAAGAAGATATTG
EST: gi|193701572|gb|FK639508.1|FK639508
EST:     GAAGAACGTATCGGCTGAAGTTTCATCTAAAACGCGAATTATTTATGGAG                         GGTCTGTAAATGCGNGCAACAGTGCTGAGCTCGCGAAGCAAGAAGATATTG
genomic: GAAGAATGTATCGGCTGAAGTTTCATCTAAAACGCGAATTATTTATGGAGgtacattggc ... tgtccttcagGGTCTGTAAATGCGAGCAACAGTGCTGAGCTCGCGAAGCAAGAAGATATTG
EST: gi|207812676|gb|GD784540.1|GD784540
EST:     TGTATCGGCTGAAGTTTCATCTAAAACGCGAATTATTTATGGAG                         GGTCTGTAAATGCGAGCAACAGTGCTGAGCTCGCGAAGCAAGAAGATATTG
genomic: TGTATCGGCTGAAGTTTCATCTAAAACGCGAATTATTTATGGAGgtacattggc ... tgtccttcagGGTCTGTAAATGCGAGCAACAGTGCTGAGCTCGCGAAGCAAGAAGATATTG
EST: gi|193627608|gb|FK576292.1|FK576292
EST:     GAAGAATGTATCGGCTGAAGTTTCATCTAAAACGCGAATTATTTATGGAG                         GGTCTGTAAATGCGAGCAACAGTGCTGAGCTCGCGAAGCAAGAAGATATTG
genomic: GAAGAATGTATCGGCTGAAGTTTCATCTAAAACGCGAATTATTTATGGAGgtacattggc ... tgtccttcagGGTCTGTAAATGCGAGCAACAGTGCTGAGCTCGCGAAGCAAGAAGATATTG
EST: gi|208166462|gb|GD960306.1|GD960306
EST:     GAAGAATGTATCGGCTGAAGTTTCATCTAAAACGCGAATTATTTATGGAG                         GGTCTGTAAATGCGAGCAACAGTGCTGAGCTCGCGAAGCAAGAAGATATTG
genomic: GAAGAATGTATCGGCTGAAGTTTCATCTAAAACGCGAATTATTTATGGAGgtacattggc ... tgtccttcagGGTCTGTAAATGCGAGCAACAGTGCTGAGCTCGCGAAGCAAGAAGATATTG
EST: gi|207736591|gb|GD709418.1|GD709418
EST:     GAAGAATGTATCGGCTGAAGTTTCATCTAAAACGCGAATTATTTATGGAG                         GGTCTGTAAATGCGAGCAACAGTGCTGAGCTCGCGAAGCAAGAAGATATTG
genomic: GAAGAATGTATCGGCTGAAGTTTCATCTAAAACGCGAATTATTTATGGAGgtacattggc ... tgtccttcagGGTCTGTAAATGCGAGCAACAGTGCTGAGCTCGCGAAGCAAGAAGATATTG
EST: gi|192305651|gb|FG998351.1|FG998351
EST:     GAAGAATGTATCGGCTGAAGTTTCATCTAAAACGCGAATTATTTATGGAG                         GGTCTGTAAATGCGAGCAACAGTGCTGAGCTCGCGAAGCAAGAAGATATTG
genomic: GAAGAATGTATCGGCTGAAGTTTCATCTAAAACGCGAATTATTTATGGAGgtacattggc ... tgtccttcagGGTCTGTAAATGCGAGCAACAGTGCTGAGCTCGCGAAGCAAGAAGATATTG
EST: gi|208272347|gb|GE073189.1|GE073189
EST:     GAAGAATGTATCGGCTGAAGTTTCATCTAAAACGCGAATTATTTATGGAG                         GGTCTGTAAATGCGAGCAACAGTGCTGAGCTCGCGAAGCAAGAAGATATTG
genomic: GAAGAATGTATCGGCTGAAGTTTCATCTAAAACGCGAATTATTTATGGAGgtacattggc ... tgtccttcagGGTCTGTAAATGCGAGCAACAGTGCTGAGCTCGCGAAGCAAGAAGATATTG
EST: gi|193393474|gb|FK358850.1|FK358850
EST:     GAAGAATGTATCGGCTGAAGTTTCATCTAAAACGCGAATTATTTATGGAG                         GGTCTGTAAATGCGAGCAACAGTGCTGAGCTCGCGAAGCAAGAAGATATTG
genomic: GAAGAATGTATCGGCTGAAGTTTCATCTAAAACGCGAATTATTTATGGAGgtacattggc ... tgtccttcagGGTCTGTAAATGCGAGCAACAGTGCTGAGCTCGCGAAGCAAGAAGATATTG
EST: gi|208069326|gb|GD872090.1|GD872090
EST:     GAAGAATGTATCGGCTGAAGTTTCATCTAAAACGCGAATTATTTATGGAG                         GGTCTGTAAATGCGAGCAACAGTGCTGAGCTCGCGAAGCAAGAAGATATTG
genomic: GAAGAATGTATCGGCTGAAGTTTCATCTAAAACGCGAATTATTTATGGAGgtacattggc ... tgtccttcagGGTCTGTAAATGCGAGCAACAGTGCTGAGCTCGCGAAGCAAGAAGATATTG
EST: gi|208217525|gb|GE010755.1|GE010755
EST:     GAAGAATGTATCGGCTGAAGTTTCATCTAAAACGCGAATTATTTATGGAG                         GGTCTGTAAATGCGAGCAACAGTGCTGAGCTCGCGAAGCAAGAAGATATTG
genomic: GAAGAATGTATCGGCTGAAGTTTCATCTAAAACGCGAATTATTTATGGAGgtacattggc ... tgtccttcagGGTCTGTAAATGCGAGCAACAGTGCTGAGCTCGCGAAGCAAGAAGATATTG
EST: gi|31466692|gb|CD408720.1|CD408720
EST:     GAAGAATGTATCGGCTGAAGTTTCATCTAAAACGCGAATTATTTATGGAG                         GGTCTGTAAATGCGAGCAACAGTGCTGAGCTCGCGAAGCAAGAAGATATTG
genomic: GAAGAATGTATCGGCTGAAGTTTCATCTAAAACGCGAATTATTTATGGAGgtacattggc ... tgtccttcagGGTCTGTAAATGCGAGCAACAGTGCTGAGCTCGCGAAGCAAGAAGATATTG
EST: gi|208289535|gb|GE086738.1|GE086738
EST:     GAAGAATGTATCGGCTGAAGTTTCATCTAAAACGCGAATTATTTATGGAG                         GGTCTGTAAATGCGAGCAACAGTGCTGAGCTCGCGAAGCAAGAAGATATTG
genomic: GAAGAATGTATCGGCTGAAGTTTCATCTAAAACGCGAATTATTTATGGAGgtacattggc ... tgtccttcagGGTCTGTAAATGCGAGCAACAGTGCTGAGCTCGCGAAGCAAGAAGATATTG
EST: gi|14205933|gb|BG839611.1|BG839611
EST:     AAGAATGTATCGGGCTGAAGTTTCATNTAAAACGCGAATTATTTATGGAG                         GGTCTGTAAATGCGAGCAACAGTGCTGAGCTCGCGAAGCAAGAAGATATTG
genomic: AAGAATGTATC-GGCTGAAGTTTCATCTAAAACGCGAATTATTTATGGAGgtacattggc ... tgtccttcagGGTCTGTAAATGCGAGCAACAGTGCTGAGCTCGCGAAGCAAGAAGATATTG
EST: gi|207822289|gb|GD796086.1|GD796086
EST:     GAAGAATGTATCGGCTGAAGTTTCATCTAAAACGCGAATTATTTATGGAG                         GGTCTGTAAATGCGAGCAACAGTGCTGAGCTCGCGAAAGCAAAGAAGATAT
genomic: GAAGAATGTATCGGCTGAAGTTTCATCTAAAACGCGAATTATTTATGGAGgtacattggc ... tgtccttcagGGTCTGTAAATGCGAGCAACAGTGCTGAGCTCGCGAA-GCAA-GAAGATAT
EST: gi|208031790|gb|GD831270.1|GD831270
EST:     TATCGGCTGAAGTTTCATCTAAAACGCGAGTTATTTATGGAG                         GGTCTGTAAATGCGAGCAACAGTGCTGAGCTCGCGAAGCAAGAAGATATTG
genomic: TATCGGCTGAAGTTTCATCTAAAACGCGAATTATTTATGGAGgtacattggc ... tgtccttcagGGTCTGTAAATGCGAGCAACAGTGCTGAGCTCGCGAAGCAAGAAGATATTG
EST: gi|193554073|gb|FK514224.1|FK514224
EST:     AGAATGTATCGGCTGAAGTTTCAATCTAAAACGCGAATTATTTATAGGAG                         GGTCTGTAAATGCGAGCAACAGTGCTGAGCTCGCGAAGCAAGAAGATATT
genomic: AGAATGTATCGGCTGAAGTTTC-ATCTAAAACGCGAATTATTTAT-GGAGgtacattggc ... tgtccttcagGGTCTGTAAATGCGAGCAACAGTGCTGAGCTCGCGAAGCAAGAAGATATT
EST: gi|208330957|gb|GE131796.1|GE131796
EST:     GAAGAATGTATCGGCTGAAGTTTCATCTAAAACGCGAATTATTTATGGAG                         GGTCTGTAAATGCGAGCAGCAGTGCTGAGCTCGCGAAGCAAGAAGATATTG
genomic: GAAGAATGTATCGGCTGAAGTTTCATCTAAAACGCGAATTATTTATGGAGgtacattggc ... tgtccttcagGGTCTGTAAATGCGAGCAACAGTGCTGAGCTCGCGAAGCAAGAAGATATTG
EST: gi|208252497|gb|GE046117.1|GE046117
EST:     GAAGAATGTATCGGCTGAAGTTTCATCTAAAACGCGAATTATTTATGGAG                         GGTCTGTAAATGCGAGCAACAGTGCTGAGCTCGCGAAGCAAGAAGATATTG
genomic: GAAGAATGTATCGGCTGAAGTTTCATCTAAAACGCGAATTATTTATGGAGgtacattggc ... tgtccttcagGGTCTGTAAATGCGAGCAACAGTGCTGAGCTCGCGAAGCAAGAAGATATTG
EST: gi|207711640|gb|GD694116.1|GD694116
EST:     GAAGAATGTATCGGCTGAAGTTTCATCTAAAACGCGAATTATTTATGGAG                         GGTCTGTAAATGCGAGCAACAGTGCTGAGCTCGCGAAGCAAGAAGATATTG
genomic: GAAGAATGTATCGGCTGAAGTTTCATCTAAAACGCGAATTATTTATGGAGgtacattggc ... tgtccttcagGGTCTGTAAATGCGAGCAACAGTGCTGAGCTCGCGAAGCAAGAAGATATTG
EST: gi|193316902|gb|FK281120.1|FK281120
EST:     GTATCGGCTGAAGTTTCATCTAAAACGCGAATTATTTATGGAG                         GGTCTGTAAATGCGAGCAACAGTGCTGAGCTCGCGAAGCAAGAAGATATTG
genomic: GTATCGGCTGAAGTTTCATCTAAAACGCGAATTATTTATGGAGgtacattggc ... tgtccttcagGGTCTGTAAATGCGAGCAACAGTGCTGAGCTCGCGAAGCAAGAAGATATTG
EST: gi|208245520|gb|GE048858.1|GE048858
EST:     CGGCTGAAGTTTCATCTAAAACGCGAATTATTTATGGAG                         GGTCTGTGAATGCGAGCAACAGTGCTGAGCTCGCGAAGCAAGAAGATATTG
genomic: CGGCTGAAGTTTCATCTAAAACGCGAATTATTTATGGAGgtacattggc ... tgtccttcagGGTCTGTAAATGCGAGCAACAGTGCTGAGCTCGCGAAGCAAGAAGATATTG
EST: gi|193461220|gb|FK427233.1|FK427233
EST:     GAAGAGTGTATCGGCTGAAGTTTCATCTAAAACGCGAATTATTTATGGAG                         GGTCTGTAAATGCGAGCAACAGTGCTGAGCTCGCGAAGCAAGAAGATATTG
genomic: GAAGAATGTATCGGCTGAAGTTTCATCTAAAACGCGAATTATTTATGGAGgtacattggc ... tgtccttcagGGTCTGTAAATGCGAGCAACAGTGCTGAGCTCGCGAAGCAAGAAGATATTG
EST: gi|151401788|gb|EV271601.1|EV271601
EST:     GAAGAATGTATCGGCTGAAGTTTCATCTAAAACGCGAATTATTTATGGAG                         GGTCTGTAAATGCGAGCAACAGTGCTGAGCTCGCGAAGCAAGAAGATATTG
genomic: GAAGAATGTATCGGCTGAAGTTTCATCTAAAACGCGAATTATTTATGGAGgtacattggc ... tgtccttcagGGTCTGTAAATGCGAGCAACAGTGCTGAGCTCGCGAAGCAAGAAGATATTG
EST: gi|207708602|gb|GD690914.1|GD690914
EST:     GAAGAATGTATCGGCTGAAGTTTCATCTAAAACGCGAATTATTTATGGAG                         GGTCTGTAAATGCGAGCAACAGTGCTGAGCTCGCGAAGCAAGAAGATATTG
genomic: GAAGAATGTATCGGCTGAAGTTTCATCTAAAACGCGAATTATTTATGGAGgtacattggc ... tgtccttcagGGTCTGTAAATGCGAGCAACAGTGCTGAGCTCGCGAAGCAAGAAGATATTG
EST: gi|208229770|gb|GE026093.1|GE026093
EST:     GAAGAATGTATCGGCTGAAGTTTCATCTAAAACGCGAATTATTTATGGAG                         GGTCTGTAAATGCGAGCAACAGTGCTGAGCTCGCGAAGCAAGAAGATATTG
genomic: GAAGAATGTATCGGCTGAAGTTTCATCTAAAACGCGAATTATTTATGGAGgtacattggc ... tgtccttcagGGTCTGTAAATGCGAGCAACAGTGCTGAGCTCGCGAAGCAAGAAGATATTG
EST: gi|209714415|gb|BW659099.1|BW659099
EST:     GAAGAATGTATCGGCTGAAGTTTCATCTAAAACGCGAATTATTTATGGAG                         GGTCTGTAAATGCGAGCAACAGTGCTGAGCTCGCGAAGCAAGAAGATATTG
genomic: GAAGAATGTATCGGCTGAAGTTTCATCTAAAACGCGAATTATTTATGGAGgtacattggc ... tgtccttcagGGTCTGTAAATGCGAGCAACAGTGCTGAGCTCGCGAAGCAAGAAGATATTG
EST: gi|7145968|gb|AW507890.1|AW507890
EST:     GAAGAATGTATCGGCTGAAGTTTCATCTAAAACGCGAATTATTTATGGAG                         GGTCTGTAAATGCGAGCAACAGTGCTGAGCTCGCGAAGCAAGAAGATATTG
genomic: GAAGAATGTATCGGCTGAAGTTTCATCTAAAACGCGAATTATTTATGGAGgtacattggc ... tgtccttcagGGTCTGTAAATGCGAGCAACAGTGCTGAGCTCGCGAAGCAAGAAGATATTG
EST: gi|193681277|gb|FK621669.1|FK621669
EST:     GAAGAATGTATCGGCTGAAGTTTCATCTAAAACGCGAATTATTTATGGAG                         GGTCTGTAAATGCGAGCAACAGTGCTGAGCTCGCGAAGCAAGAAGATATTG
genomic: GAAGAATGTATCGGCTGAAGTTTCATCTAAAACGCGAATTATTTATGGAGgtacattggc ... tgtccttcagGGTCTGTAAATGCGAGCAACAGTGCTGAGCTCGCGAAGCAAGAAGATATTG
EST: gi|208213931|gb|GE014488.1|GE014488
EST:     GAAGAATGTATCGGCTGAAGTTTCATCTAAAACGCGAATTATTTATGGAG                         GGTCTGTAAATGCGAGCAACAGTGCTGAGCTCGCGAAGCAAGAAGATATTG
genomic: GAAGAATGTATCGGCTGAAGTTTCATCTAAAACGCGAATTATTTATGGAGgtacattggc ... tgtccttcagGGTCTGTAAATGCGAGCAACAGTGCTGAGCTCGCGAAGCAAGAAGATATTG
EST: gi|193713466|gb|FK651931.1|FK651931
EST:     GAAGAATGTATCGGCTGAAGTTTCATCTAAAACGCGAATTATTTATGGAG                         GGTCTGTAAATGCGAGCAACAGTGCTGAGCTCGCGAAGCAAGAAGATATTG
genomic: GAAGAATGTATCGGCTGAAGTTTCATCTAAAACGCGAATTATTTATGGAGgtacattggc ... tgtccttcagGGTCTGTAAATGCGAGCAACAGTGCTGAGCTCGCGAAGCAAGAAGATATTG
EST: gi|208341330|gb|GE139012.1|GE139012
EST:     GAAGAATGTATCGGCTGAAGTTTCATCTAAAACGCGAATTATTTATGGAG                         GGTCTGTAAATGCGAGCAACAGTGCTGAGCTCGCGAAGCAAGAAGATATTG
genomic: GAAGAATGTATCGGCTGAAGTTTCATCTAAAACGCGAATTATTTATGGAGgtacattggc ... tgtccttcagGGTCTGTAAATGCGAGCAACAGTGCTGAGCTCGCGAAGCAAGAAGATATTG
EST: gi|207825805|gb|GD798594.1|GD798594
EST:     GAAGAATGTATCGGCTGAAGTTTCATCTAAAACGCGAGTTATTTATGGAG                         GGTCTGTAAATGCGAGCAACAGTGCTGAGCTCGCGAAGCAAGAAGATATTG
genomic: GAAGAATGTATCGGCTGAAGTTTCATCTAAAACGCGAATTATTTATGGAGgtacattggc ... tgtccttcagGGTCTGTAAATGCGAGCAACAGTGCTGAGCTCGCGAAGCAAGAAGATATTG
EST: gi|208116823|gb|GD918591.1|GD918591
EST:     GAAGAATGTATCGGCTGAAGTTTCATCTAAAACGCGAATTATTTATGGAG                         GGTCTGTAAATGCGAGCAACAGTGCTGAGCTCGTGAAAGCAAGAAGAT
genomic: GAAGAATGTATCGGCTGAAGTTTCATCTAAAACGCGAATTATTTATGGAGgtacattggc ... tgtccttcagGGTCTGTAAATGCGAGCAACAGTGCTGAGCTCGCGAA-GCAAGAAGAT
EST: gi|10256070|gb|BE823836.1|BE823836
EST:     GAAGAATGTATCGGCTGAAGTTTCATCTAAAACGCGAATTATTTATGGAG                         GGTCTGTAAATGCGAGCAACAGTGCTGAGCTCGCGAAGCAAGAAGATATTG
genomic: GAAGAATGTATCGGCTGAAGTTTCATCTAAAACGCGAATTATTTATGGAGgtacattggc ... tgtccttcagGGTCTGTAAATGCGAGCAACAGTGCTGAGCTCGCGAAGCAAGAAGATATTG
EST: gi|207808049|gb|GD779644.1|GD779644
EST:     GAAGAATGTATCGGCTGAAGTTTCATCTAAAACGCGAATTATTTATGGAG                         GGTCTGTAAATGCGAGCAACGGTGCTGAGCTCGCGAAGCAAGAAGATATTG
genomic: GAAGAATGTATCGGCTGAAGTTTCATCTAAAACGCGAATTATTTATGGAGgtacattggc ... tgtccttcagGGTCTGTAAATGCGAGCAACAGTGCTGAGCTCGCGAAGCAAGAAGATATTG
EST: gi|208241017|gb|GE038685.1|GE038685
EST:     GAAGAATGTATCGGCTGAAGTTTCATCTAAAACGCGAATTATTTATGGAG                         GGTCTGTAAATGCGAGCAACAGTGCTGAGCTCGCGAAGCAAGAAGATATTG
genomic: GAAGAATGTATCGGCTGAAGTTTCATCTAAAACGCGAATTATTTATGGAGgtacattggc ... tgtccttcagGGTCTGTAAATGCGAGCAACAGTGCTGAGCTCGCGAAGCAAGAAGATATTG
EST: gi|14205825|gb|BG839503.1|BG839503
EST:     GAAGAATGTATCGGCTGAAGTTTCATCTAAAACGCGAATTATTTATGGAG                         GGTCTGTAAATGCGAGCAACAGTGCTGAGCTCGCGAAGCAAGAAGATATTG
genomic: GAAGAATGTATCGGCTGAAGTTTCATCTAAAACGCGAATTATTTATGGAGgtacattggc ... tgtccttcagGGTCTGTAAATGCGAGCAACAGTGCTGAGCTCGCGAAGCAAGAAGATATTG
EST: gi|193552767|gb|FK507004.1|FK507004
EST:     GAAGAATGTATCGGCTGAAGTTTCATCTAAAACGCGAATTATTTATGGAG                         GGTCTGTAAATGCGAGCAACAGTGCTGAGCTCGCGAAGCAAGAAGATATTG
genomic: GAAGAATGTATCGGCTGAAGTTTCATCTAAAACGCGAATTATTTATGGAGgtacattggc ... tgtccttcagGGTCTGTAAATGCGAGCAACAGTGCTGAGCTCGCGAAGCAAGAAGATATTG
EST: gi|208135010|gb|GD926657.1|GD926657
EST:     CGGCTGAAGTTTCATCTAAAACGCGAATTATTTATGGAG                         GGTCTGTAAATGCGAGCAACAGTGCTGAGCTCGCGAAGCAAGAAGATATTG
genomic: CGGCTGAAGTTTCATCTAAAACGCGAATTATTTATGGAGgtacattggc ... tgtccttcagGGTCTGTAAATGCGAGCAACAGTGCTGAGCTCGCGAAGCAAGAAGATATTG
EST: gi|207692130|gb|GD676091.1|GD676091
EST:     GAAGAATGTATCGGCTGAAGTTTCATCTAAAACGCGAATTATTTATGGAG                         GGTCTGTAAATGCGAGCAACAGTGCTGAGCTCGCGAAGCAAGAAGATATTG
genomic: GAAGAATGTATCGGCTGAAGTTTCATCTAAAACGCGAATTATTTATGGAGgtacattggc ... tgtccttcagGGTCTGTAAATGCGAGCAACAGTGCTGAGCTCGCGAAGCAAGAAGATATTG

Putative cis-regulatory sequences

 atgc intron ATGC exonic elements by Pertea et al.
 ATGC exon atgc putative intronic elements
 ATGC putative exonic elements identified for retained introns
        10        20        30        40        50        60        70        80        90        100       110       120       130       140       150       160       170       180       190       200       210       220 
---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| 
ACACCCGAGCAAGCCCAGGAAGTCCATGCAGCTGTTCGTGACTGGCTTAAGAAGAATGTATCGGCTGAAGTTTCATCTAAAACGCGAATTATTTATGGAGgtacattggcttttgtaactatgcatgctgcatttgttagtgtcagaaatttaagattcagtttaataagattgcaagctttgttcaaagtggtgtaatc

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - CTGAAG