1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' | 12 5' 3' | 13 5' 3' |
CTTGGCCATCTATCTTTGGGTTTTTACGTTTGGTCTTTCTATTGTGATGATGACCCTTTATCCAGTACTAATAGCTCCACTCTTCAATAAGTTCACTCCAgtaagaatttcttaacttgatattttaaaaaaaatacatataccatatttttttattttagttttgggataattacattgaattcttccaaggttagcac...
species | Glycine max |
transcript | GLYMA09G39150.1 |
intron # | 7 |
splice site | 5' |
intron type | U2 |
EST: TGACCCTTTATCCAGTACTAATAGCTCCACTCTTCAATAAGTTCACTCCA CTTCCAGATGGTCAACTCAGGGAGAAAAEST: gi|151398881|gb|EV268752.1|EV268752
genomic: TGACCCTTTATCCAGTACTAATAGCTCCACTCTTCAATAAGTTCACTCCAgtaagaattt ... tgataactagCTTCCAGATGGTCAACTCAGGGAGAAAA
EST: GACCCTTTTATCCAGTACTAATAGCTCCACTCTTCAATAAGTTCACTCCA CTTCCAGATGGTCAACTCAGGGAGAAAATCGAGAAACTTGCTTCCTCCCTCEST: gi|5175463|gb|AI759796.1|AI759796
genomic: GACCC-TTTATCCAGTACTAATAGCTCCACTCTTCAATAAGTTCACTCCAgtaagaattt ... tgataactagCTTCCAGATGGTCAACTCAGGGAGAAAATCGAGAAACTTGCTTCCTCCCTC
EST: TGA-CCTTTATCCAGTACTAATAGCTCCACTCTTCAATAAGTTCACTCCA CTT-CAGAATGGTCAACTCAGGGAGAAAATCGAGAAACTTGCTTCCTCCCTEST: gi|17519798|gb|BM188840.1|BM188840
genomic: TGACCCTTTATCCAGTACTAATAGCTCCACTCTTCAATAAGTTCACTCCAgtaagaattt ... tgataactagCTTCCAG-ATGGTCAACTCAGGGAGAAAATCGAGAAACTTGCTTCCTCCCT
EST: TGACCCTTTATCCAGTACTAATAGCTCCACTCTTCAATAAGTTCACTCCA CTTCCAGATGGTCAACTCAGGGAGAAAATCGAGAAACTTGCTTCCTCCCTCEST: gi|308099210|gb|HO761388.1|HO761388
genomic: TGACCCTTTATCCAGTACTAATAGCTCCACTCTTCAATAAGTTCACTCCAgtaagaattt ... tgataactagCTTCCAGATGGTCAACTCAGGGAGAAAATCGAGAAACTTGCTTCCTCCCTC
EST: ACTAATAGCTCCACTCTTCAATAAGTTCACTCCA CTTCCAGATGGTCAACTCAGGGAGAAAATCGAGAAACTTGCTTCCTCCCTCEST: gi|5175455|gb|AI759788.1|AI759788
genomic: ACTAATAGCTCCACTCTTCAATAAGTTCACTCCAgtaagaattt ... tgataactagCTTCCAGATGGTCAACTCAGGGAGAAAATCGAGAAACTTGCTTCCTCCCTC
EST: TGACCCTTTATCCAGTACTAATAGCTCCACTCTTCAATAAGTTCACTCCA CTTCCAGATGGTCAACTCAGGGAGAAAATCGAGAAACTTGCTTCCTCCCTC
genomic: TGACCCTTTATCCAGTACTAATAGCTCCACTCTTCAATAAGTTCACTCCAgtaagaattt ... tgataactagCTTCCAGATGGTCAACTCAGGGAGAAAATCGAGAAACTTGCTTCCTCCCTC
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| CTTGGCCATCTATCTTTGGGTTTTTACGTTTGGTCTTTCTATTGTGATGATGACCCTTTATCCAGTACTAATAGCTCCACTCTTCAATAAGTTCACTCCAgtaagaatttcttaacttgatattttaaaaaaaatacatataccatatttttttattttagttttgggataattacattgaattcttccaaggttagcac
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